Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00649 ATGAAAACGAAGCTTCTTCTTTTGCTTCTCATGTTCCTCCTTATTCTCCACAAACCCGTTTGGACTCTTGCCTCACCATACCCTCTTGCCCCCTCACCCCAAGTTCCACCCTTTTCTCCATTTCCCAATTCAATGTCTGCTTCCTCTCCAGGAATTGTGATGGGGGCTGAACAGCAGCAAATGGATTCGCACAAGAAAATGGTAATTGCTATTGCCGTAGCCAGCGCTTCACTTGGTGCAGTCATTTTGAGTGTGTTGTGCATCTGGATTTATCATACCAAGTACTCTTCAAAATCCAAAGCGAAAAATGTTCAACGATCAGATGCTGAGAAAGGACTAGCTTCATCACCAACTTTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAGGCCACTGGTAATTACAAGGAAAGTAACATCTTGGGTGAGGGAGGTTTTGGATGTGTTTACAAAGCACATTTGGATGATAATTTGGAAGCTGCCGTTAAGAAATTGTACTGTGACAATCAGTATGCTGAGGAAGAATATGAGAACGAGGTCGAATTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTGCTGGGATGTAGCAGTAATGAAGATACACGGATTATTGTGTATGAGTTGATGCATAATGGATCATTGGAAACTCAATTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCATTTGAGGATGAAAATTGCTCTTGACACAGCAAGGGGATTAAAATATCTGCATGAACACTGTTACCCTCCGGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATACAAAGTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATTACCAATGGGACCCAAAACAAGAATAATATCAAACTTTCAGGCACGTTGGGTTACGTAGCTCCGGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTATATGCTTTTGGAGTTGTGCTGCTGGAGCTTCTCTTGGGAAAGAAGCCTGTGGAAAAACTAGCTCCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCTCAGCTCACAGACAGATCTAAGCTTCCAAACATCGTGGATCCTGTAATTAAGGATACAATGGACCCCAAACACTTATACCAGGTTGCTGCAGTGGCCGTGCTGTGCGTGCAACCAGAGCCAAGTTACCGTCCCCTGATTGCAGATGTTCTTCACTCACTCATCCCCCTTGTCCCTGTAGAGCTTGGAGGAACACTCAAAGTCGCACAACTGCCACAGCAAGTCTTACCTGCTAACCCACATGAGGATTCTAGTCCATGA 1356 0.4255 MKTKLLLLLLMFLLILHKPVWTLASPYPLAPSPQVPPFSPFPNSMSASSPGIVMGAEQQQMDSHKKMVIAIAVASASLGAVILSVLCIWIYHTKYSSKSKAKNVQRSDAEKGLASSPTLSKFSSIKLVGKKGCVPIIDYKQIEKATGNYKESNILGEGGFGCVYKAHLDDNLEAAVKKLYCDNQYAEEEYENEVELLSKIQHPNVISLLGCSSNEDTRIIVYELMHNGSLETQLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLDTKFNAKLSDFGLAITNGTQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKDTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVAQLPQQVLPANPHEDSSP* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00649 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Lapu8g00649 451 PANTHER OS01G0750732 PROTEIN 53 422 - -
Lapu8g00649 451 ProSiteProfiles Protein kinase domain profile. 149 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00649 451 FunFam Protein kinase superfamily protein 116 224 - -
Lapu8g00649 451 Gene3D Transferase(Phosphotransferase) domain 1 225 424 - -
Lapu8g00649 451 SMART serkin_6 149 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00649 451 Pfam Protein kinase domain 149 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00649 451 Gene3D Phosphorylase Kinase; domain 1 110 224 - -
Lapu8g00649 451 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Lapu8g00649 451 FunFam probable receptor-like protein kinase At1g80640 225 424 - -
Lapu8g00649 451 SUPERFAMILY Protein kinase-like (PK-like) 135 417 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00649 Lapu-Chr8 24283800 24288771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00649 27 365 Receptor kinase-like Gene Family AT1G80640 48.830 3.51e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lapu8g00649 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00649 - - vra:106764755 822.002