Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00644 ATGGTTGGTTTGAATAATAGTAGTAATTTTGAGTTCCACAATATTCGGGGCAGCAATACTGCTACTCAGCACACAGTTCCTTGTGGTGAGAATGCAAGACAATCTTTTCCTTGTCCAGGTCAGTGCCGAGATACATGCCCTGCATTTGGTCTAAATGTTTGCTACTCAGATATTCAGACTACACCAAATATTGCTTTAGAATGGTGCTCATCTAAGTATGCGACTCCTTTTATGAGTGGGTGTCCTCGTGTGTTCTGCGTGAGAAAAAGTGGCCATCTTCTTCTTAGCCATACAGGACTTCTTGGTGTTGTTTGCTCATGTCATTGTTGCCACATGTCTGTTCTTAAGTTTTGTGAGCATTCAGGGTTACATGGCGTTGACCCAGGGGATGCTGTTTGTATGGAGAGTGGAGAGACCATTTCACAATGGCGAAAGCTATACTTCTTGAAGTTTGGGATTAGGTTTCTGGGGAATGAGAATGAATGGGACTGGCCAGAAGTATTATCAACAACAGGCAGTGCGATGAAATCCAATGCATCTGCGTTTGATATGTCCAAGACTAATTTGTCTCATATGTTGAGTTCATCTGCAGTCATGTCCAGAAAACAAGCAACAACAATCCAGGATGGTTGCAACATTCCACTCAAAGGTTTTACTAGTATTTCACAAAACAGCGTTGTTGATCAATTGAAAAACCAGTTAATAGTATCCAATCCGGCTATGTATACAACTGCACCAAATTTTGGTGGAACTCAACTGGATGATGGTTGTCACCCTATACCTCCTTTCTTGGATTCTCTGAAAAGGAAAGGAAGTTTGTCAACTGCCCACTCACCTTTGCAAACACCAATAAACCTTTTGAAAGACCATGATTGCATAAAAAAGAATGCAAATGATGGTCTTGTAGGCAGAGACGCAGCTTCCTCTAATGTTGATCTTATGCTTGGTCAACCACCTCAGACAGGAAATCCACTTCCGTCATTTATAGAACCGCTGCTGTTTAATGCCGTTGCCAGTTCACCAAACTTGCAACCTCAGAAGCAGATGATTAATAACCTCAGCAGGGAGGAGGGATTACAGAATAATTTTAGCTATGCTGCTGGTTCATTCAAAATGGTTGAAGAATTGCCTCAGCTTAAACCCAAGAACTATATGTCAGCTATGAGTAAGGCTTCTGCTAAAGCTAGATCAGAAACCAAAAATGTGGCTAAGGGTGTGTCATTTTCACCATTTTCGCAAATTGATATACCTGGAGGAAAGACACAAGCTAGTGAAAATTTGTGGAACGATGACAGCCCTATCATGCCTAAGAAACTGTATTCTGATTCTGTTCACTCTGGAAGGCAATCAAATAAGTTTGTTGTAGGGACCAATAAATATTTGGACAATAATAAAGGGGCGAGCTTTGCCAAAGATTCTGGTGCCAGAAAAATTTCTGGATTTGGAATTGGTCATTTAATGAAATATCCAAGCTCCATCATGAGAGCTGTTGGTGGTTGTGATAGATGTATTTCAGTTGTTAATGAAAAGATGTATGAATCAAATTATGAATCTAGCTTGCCATCAGAAACATCCGTGGGTGCAAATATTTTGCATGATTCACACAATATATCTTCTCTTGGACTAGAAAATCAAGTGAATCCACAGACCTCCATTCCAGTTAGAGAGATTTTGAAAGGTCTTCCCTATGATGTTCCAATTTCTGTGTCTAATCAGACTCCGACTTTGCTACAGCAGCAGGCCATTAATATGGATGCTTATTTAGTTGATGAAAACACGAGGTTGCTTTCAATGACACAGATACCGGAGTTATCTAAGCAACATCATGCATTGCATTTTAATATGAATCAGAAGCAAGGAGAATCTGGCAGTATTTGGAAAGTTCAGCATTATACTTGTGAGGCTTCAACATCTGAACAGGGAACCTCTTGTGCAGCATTGAAATTGCCTCAAAATAAAGGGATTTTTTGGAATCATGAGAATACTGTTGGTTTAGAGAAGTTGCCTTCCGCCACAGGTATGAACGGATATTATCAGTTATCTGACCTGTCACCAACATCTTTACATTCTAAAGAAAAGGAATCGCTTAAACATTCTTATGATCTTCGAAATGAAGAGACTTCTTTAAGCCTTGGTATAAACAAAGACAATATCAGATCAAGTGCATATGAAAAATGCTCTGAGCAACCATCAAATGTATGTTTGGAAGGCAAGTATCCTTGTACTGCTCTGATAAACTGTTGCCGAAGCAACTTTTTCTCAGGGATTGAACCCCTTTGTAATAACTTAAGGCAACAACTTGTTGATGTTATAGGTGAAACTTCTTTGAAGATGCCTTCAGATTTGTGTAGAAACTTGAATACATCGAACAACAGAGATATCCACTTTGAGCTAGGTGGGAAGATACTTGGCCAAGACTCGACCAGAATTGGCTTTCATACTCCTCAATGGAGAGATGTGCCCAATAAGGTCCGGAAAGCAGTTTGTGATGCAACATCTTTAGATCAAACATCTACTGGTTTGGATAGGGAAGTACGAGATGGTTTTCAATTTATAGACATTTCCATGAAGCGCCCCAAAAGAACTATTGATATGGGAGACGTGTCAAAAGAAAAAGAAAATTCTATTGTTTCTTCTGGATGCTCTGTGCCCGTGGTTACTCAGGCATCTGTGATGGTCAACAAAATTGATTACTGTACTGATGATGCTGTAAACAATGGCTTTGTCAACAACCTTGTCGTTGATGAAGGGTCAGGTATTGATCAAGGCTCCTTGTCAGATTTGGTTGTAAGTGAAAGAACTGATGAGTTTCAAGATTCGATCTCTGGGAATTACTTGAAAAATGGTTGTTCGAGAGTCTTAAATGACGAATCATGTTGCAATCTCCTTGATGATCTTAAACTGTTAGATTCATTGATATGGAAGAAAGAAAGGAATCAAAATCATTTTGTGCTTTCTCCTAATTGTAAATCCAATCAATCTCAGAAAGTCAAGAGGGGCATCAAAGGAAAAAAGCGAAAGAGAAATTTGGTGAGGATTCTAGATGCTTCATTGTCTTCTGAATTCCCTTCCTTGTTGCGCAATAAGAATGATGAAGGTGCTGGGATTTTTAATTCCACTTCTAGTTTGTCAAAAGAAATGCAAATGCACACTCTGTCTAGCTTGCGGAAATCGTTTAACAAGTCTTCCTTTGTTCAACCTTGTAACAGACAAATACAGTCTGCATTTTCATCCAAATTTATTTCCTGTAAGAATCGTCTTAGCAAGCATCTTAGTTATAAAGTTGCCTATGAGTCTCAATCAGATTCTGATGCCGAGTTTCACTCATTACCTGGTGTTTCTGGAACAAAGAAATGGAGAAAGAATCTCACATCTGATTGTTTTGAGCAGTTTCATATGCAAGAACCATCCTATGAGGAACCTGAAAATGCTACGTTGAGGCCATTCTCATGCAGGAAGGAAAATGATCATAGAATCACAAGGCCAGTAGTATGTGGAAAATATGGTGAAATATGTAATGGGTATTTGGCTAAAGATGTGCAAAAGCCGCCAAAAATTGTCTCCCTCGACAAGATCCTTAAATCTTCCAAAAGATGTATGAGCCATACAAATGGAAAACCTAGACTAACTTCAAAAAAGAAATGGAAGAGATTGAGCATTGGAACAGATAATGGGTACTGCTGTGGGAACCGTGGTTTAAAAATTAAGGAGCACATTGAAACACGAAATACAATAATTTATAATGAAGCAAATTTTGAGGTATCCTTGGAAGACTTGGAGAGAGGTGTCAAAGATGCTAAAGCTAAGCGGGGTGTTAGGGTTGGAAATAGAGAAAATGTTCCATTGAAGGTGAAGAACAAGGACATTCGGAAACACCGTAGCATTAATGAACTCACTGCTAAAGAAACCAAAGTGACGGATATGATGAATTGTGCTCAAGACAAAGAGCCTGGTTTGTGTAGCACAAAAAGTAGAAATTCTATTCAAAGTCACATAAACATATCAACAATAAACTCAGATACCTTCTGCTGTGTGTGTCAAAGCTCGAGCAATGATAAAATCAACTGTTTGTTGGAATGTTGTCAATGCCTAATTAGAGTGCATCAAGCTTGCTATGGTGTTTCCACATTACCCAAAAAAAGTCGTTGGTGCTGCAGACCATGCCGAACCAACTCAAAAAATATTGCTTGTGTCCTATGTGGTTATGGAGGTGGAGCCATGACTCGAGCCACAATGAGTCACACAATTGTCAAGAGCCTCCTAAAAGTGTGGAATGGTGAGAAAGATGGCATGCCTAAGCATACAACTTCATGTGAATTTTTTGAAAACGAAATAGATGCATTCCCATCCTCAAAAGCTGATCAAGAAAGTGTTTTGAAGCCTAAAATGGTTAATAGATCAACAGATCTGGTGAAAGTTCAAATATCTACAAATCACACGCAACACACCCGTGCTACTCTTTCTAATTTCAAGGTACACAACAGCATTACTGCAGGAGTTCTTGATCCAACTGTTAAACAATGGATTCATATGGTTTGTGGTCTTTGGACTCCTGGAACAAGATGCCCAAATGTTGACACAATGAGTGCTTTTGATGTATCTGGTGTTTCGCGTCCCAAAGAAGATGTGGCTTGTTCCATTTGCAATAGATGGGGTGGTTCTTGTATAGAGTGCAGGATGGCTGACTGCTCTGTCAAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTGTTGCAAAGTGAGACTGAAGGTATTGATGATGAGAATATTGGATTTTATGGAAGATGCATGCTTCATACTTATGAACCTAGATATCTGTCCATATATGATCCTATTGATGAAATTGGAAGTGAAGAAGAAAAGGAATTCACCTGTGCCAGGGTAGAGGGTTACAAGGGCAGAAGATGGGATGGTTTTCAGAATAATCACTGCCAAGGTGGATGCCTTGTTCCTGAGGAGCAGCTTAATGCTTGGATTCACATCAACGGGCAGAAGTTATGTACTCAGGGGCTCACAAGATTCCCAGATTTGGATATGGAGCATGATTGTCGAAAGGAATACGCTCGCTACAAACAAGCAAAGGGATGGAAACACCTTGTTGTATACAAGTCCCGTATACATGCACTTGGTCTTTACACTTCTCGGTTCATTTCCCGTGGTGAAGTGGTGGTTGAATATATAGGTGAAATTGTGGGATTGCGTGTGGCTGATAAAAGAGAGAAGGATTATCAATCTGGAAAGAAACTTCAGTACAAGAGTGCCTGCTACTTCTTCAGGATAGACAAAGAGCATATTATTGATGCCACAAGGAAAGGGGGGATTGCTCGGTTTGTTAACCACTCATGCCTGCCCAATTGCGTGGCAAAAGTGATTACTGTAAGGCATGAAAAAAAGGTTGTCTTCTTTGCAGAGAGGGATATATTTCCTGGTGAAGAGATCACGTATGATTACCACTTTAACCACGAAGACGAAGGAAAGATTCCATGTTACTGCAATTCAAAAAATTGCAGGCGCTATATGAACTGA 5526 0.3972 MVGLNNSSNFEFHNIRGSNTATQHTVPCGENARQSFPCPGQCRDTCPAFGLNVCYSDIQTTPNIALEWCSSKYATPFMSGCPRVFCVRKSGHLLLSHTGLLGVVCSCHCCHMSVLKFCEHSGLHGVDPGDAVCMESGETISQWRKLYFLKFGIRFLGNENEWDWPEVLSTTGSAMKSNASAFDMSKTNLSHMLSSSAVMSRKQATTIQDGCNIPLKGFTSISQNSVVDQLKNQLIVSNPAMYTTAPNFGGTQLDDGCHPIPPFLDSLKRKGSLSTAHSPLQTPINLLKDHDCIKKNANDGLVGRDAASSNVDLMLGQPPQTGNPLPSFIEPLLFNAVASSPNLQPQKQMINNLSREEGLQNNFSYAAGSFKMVEELPQLKPKNYMSAMSKASAKARSETKNVAKGVSFSPFSQIDIPGGKTQASENLWNDDSPIMPKKLYSDSVHSGRQSNKFVVGTNKYLDNNKGASFAKDSGARKISGFGIGHLMKYPSSIMRAVGGCDRCISVVNEKMYESNYESSLPSETSVGANILHDSHNISSLGLENQVNPQTSIPVREILKGLPYDVPISVSNQTPTLLQQQAINMDAYLVDENTRLLSMTQIPELSKQHHALHFNMNQKQGESGSIWKVQHYTCEASTSEQGTSCAALKLPQNKGIFWNHENTVGLEKLPSATGMNGYYQLSDLSPTSLHSKEKESLKHSYDLRNEETSLSLGINKDNIRSSAYEKCSEQPSNVCLEGKYPCTALINCCRSNFFSGIEPLCNNLRQQLVDVIGETSLKMPSDLCRNLNTSNNRDIHFELGGKILGQDSTRIGFHTPQWRDVPNKVRKAVCDATSLDQTSTGLDREVRDGFQFIDISMKRPKRTIDMGDVSKEKENSIVSSGCSVPVVTQASVMVNKIDYCTDDAVNNGFVNNLVVDEGSGIDQGSLSDLVVSERTDEFQDSISGNYLKNGCSRVLNDESCCNLLDDLKLLDSLIWKKERNQNHFVLSPNCKSNQSQKVKRGIKGKKRKRNLVRILDASLSSEFPSLLRNKNDEGAGIFNSTSSLSKEMQMHTLSSLRKSFNKSSFVQPCNRQIQSAFSSKFISCKNRLSKHLSYKVAYESQSDSDAEFHSLPGVSGTKKWRKNLTSDCFEQFHMQEPSYEEPENATLRPFSCRKENDHRITRPVVCGKYGEICNGYLAKDVQKPPKIVSLDKILKSSKRCMSHTNGKPRLTSKKKWKRLSIGTDNGYCCGNRGLKIKEHIETRNTIIYNEANFEVSLEDLERGVKDAKAKRGVRVGNRENVPLKVKNKDIRKHRSINELTAKETKVTDMMNCAQDKEPGLCSTKSRNSIQSHINISTINSDTFCCVCQSSSNDKINCLLECCQCLIRVHQACYGVSTLPKKSRWCCRPCRTNSKNIACVLCGYGGGAMTRATMSHTIVKSLLKVWNGEKDGMPKHTTSCEFFENEIDAFPSSKADQESVLKPKMVNRSTDLVKVQISTNHTQHTRATLSNFKVHNSITAGVLDPTVKQWIHMVCGLWTPGTRCPNVDTMSAFDVSGVSRPKEDVACSICNRWGGSCIECRMADCSVKFHPWCAHQKNLLQSETEGIDDENIGFYGRCMLHTYEPRYLSIYDPIDEIGSEEEKEFTCARVEGYKGRRWDGFQNNHCQGGCLVPEEQLNAWIHINGQKLCTQGLTRFPDLDMEHDCRKEYARYKQAKGWKHLVVYKSRIHALGLYTSRFISRGEVVVEYIGEIVGLRVADKREKDYQSGKKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITVRHEKKVVFFAERDIFPGEEITYDYHFNHEDEGKIPCYCNSKNCRRYMN* 1842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00644 1841 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1328 1396 IPR013083 -
Lapu8g00644 1841 ProSiteProfiles SET domain profile. 1697 1818 IPR001214 GO:0005515
Lapu8g00644 1841 SMART PHD_3 1544 1600 IPR001965 -
Lapu8g00644 1841 SMART PHD_3 1342 1389 IPR001965 -
Lapu8g00644 1841 SUPERFAMILY SET domain 1659 1837 IPR046341 -
Lapu8g00644 1841 SUPERFAMILY FYVE/PHD zinc finger 1337 1394 IPR011011 -
Lapu8g00644 1841 Pfam SET domain 1710 1817 IPR001214 GO:0005515
Lapu8g00644 1841 Pfam Tify domain binding domain 100 146 IPR032308 -
Lapu8g00644 1841 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1479 1600 IPR013083 -
Lapu8g00644 1841 ProSiteProfiles Post-SET domain profile. 1825 1841 IPR003616 -
Lapu8g00644 1841 Gene3D SET domain 1612 1841 IPR046341 -
Lapu8g00644 1841 Pfam PHD-zinc-finger like domain 1505 1580 - -
Lapu8g00644 1841 Pfam PHD-finger 1355 1389 - -
Lapu8g00644 1841 SMART set_7 1697 1824 IPR001214 GO:0005515
Lapu8g00644 1841 CDD SET_SETD1-like 1699 1837 - -
Lapu8g00644 1841 SMART PostSET_3 1825 1841 IPR003616 -
Lapu8g00644 1841 ProSiteProfiles Extended PHD (ePHD) domain profile. 1486 1600 IPR034732 -
Lapu8g00644 1841 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 245 1841 - -
Lapu8g00644 1841 ProSiteProfiles Zinc finger PHD-type profile. 1340 1391 IPR019787 -
Lapu8g00644 1841 CDD ePHD 1507 1599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00644 Lapu-Chr8 24220892 24239312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00644 1699 1837 C2H2 Transcription Factor Family AT2G23740 34.591 9.06e-17 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu8g00644 SET 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00644 - - gmx:100816713 2843.91