Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00642 ATATATATTTCTATGGCATGGACTTACAAAGTTGTGTTTGGATTACCATTTCTAATTGTGATTTTTATATGTAAATGGAGAAAAAGACATATGTCAATGTATGAAAATATTGAAAATTATCTTGAACAAAATAGTTTGGCACCTATTAGATATTCATATAAGGAAATCCAAAAGATGGCTGGAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGATCTGTGTTTAAGGCAAAGTTGCGCAGCGGACCTTCTATAGCAATAAAAATGTTAGGCAAATCTAAAGGAAATGGACAAGATTTTATCAATGAAGTTGCAACTATTGGAAAAATACATCATCAAAATGTGGTACAGTTAATTGGATTTTGTGTTAGTGGCTCAAAACGTGCTCTTGTGTATGAATTCATGTTCAATGGATCTCTTGATAAACTTATTTTTTCAAAAGAAGGAAGTGTACATTTAAGCTATGACAATATGTATAATATATCAATTGGAGTGGCTCGTGGGATTGCATATCTTCATCATGGCTGTGAGATGCAGATTTTGCATTTTGACATCAAACCCCATAACATCTTATTAGATGAAAACTTCACCCCAAAGGTTTCTGATTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATTGTCACAATGACAGCAGCAAGGGGAACTATAGGATATATGGCTCCTGAACTGTTTTATAATAATATTGGAGGAATATCCCATAAGGCTGATGTTTATAGTTTTGGAATGTTATTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATCCCCATGCAGACCACTCAAGTCAACTTTACTTTCCCTTTTGGATCTACGATCAGATTAGAGAAAAGGAAGATGTGGATATTGAAGATGTATCAGAAGATGAAAAGAAAATAGCAAAAAAGATGATAATAGTAGCATTATGGTGCATTCAATTGAAACCAAATCATCGTCCCTCAATGAATAGAGTAGTAGAAATGCTTGAAGGAGACATTGAAGACTTAAACATACCTCCAAAGCCTGCTTTATTTCCGGATGAAATGATGGTAGAAGATGAAACAATCAGCTCTAATACAAGTGAGTTAGAAGATGAAACAATCAGCTCTAATACAAGTGAGTTGATCGGGTAA 1140 0.3404 IYISMAWTYKVVFGLPFLIVIFICKWRKRHMSMYENIENYLEQNSLAPIRYSYKEIQKMAGGFKEKLGEGGFGSVFKAKLRSGPSIAIKMLGKSKGNGQDFINEVATIGKIHHQNVVQLIGFCVSGSKRALVYEFMFNGSLDKLIFSKEGSVHLSYDNMYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYNNIGGISHKADVYSFGMLLMEMASKRKNLNPHADHSSQLYFPFWIYDQIREKEDVDIEDVSEDEKKIAKKMIIVALWCIQLKPNHRPSMNRVVEMLEGDIEDLNIPPKPALFPDEMMVEDETISSNTSELEDETISSNTSELIG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00642 379 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Lapu8g00642 379 Pfam Protein kinase domain 64 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00642 379 SMART serkin_6 61 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00642 379 ProSiteProfiles Protein kinase domain profile. 61 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00642 379 Gene3D Transferase(Phosphotransferase) domain 1 136 339 - -
Lapu8g00642 379 Gene3D Phosphorylase Kinase; domain 1 34 135 - -
Lapu8g00642 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Lapu8g00642 379 FunFam PR5-like receptor kinase 136 343 - -
Lapu8g00642 379 MobiDBLite consensus disorder prediction 356 379 - -
Lapu8g00642 379 PANTHER RUST RESISTANCE KINASE LR10-RELATED 34 356 IPR045874 GO:0004672
Lapu8g00642 379 FunFam serine/threonine-protein kinase PBS1-like 29 135 - -
Lapu8g00642 379 SUPERFAMILY Protein kinase-like (PK-like) 45 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00642 Lapu-Chr8 24200599 24201991 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00642 19 370 Receptor kinase-like Gene Family AT4G18250 46.849 1.49e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu8g00642 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00642 - - vum:124829704 610.527