Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00638 ATGACTGCAAGTTTTAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTGTTTAAGGGAAATTTGCGTAGCGGACCTTTTGTGGCAATCAAAATGTTAGGCAAATCTAAAGGAAATGGACAAGATTTTATTAGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTCCAATTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCACTTGTGTACGAATTCATGTCCAATGGATCTCTTGATAAACTTATTTTTTCAGAAGAAGGAAATGTACATTTAAGCTATGAAAAAATATATAATATATCAATTGGAATGGCTCGTGGAATTTCTTATCTCCACCATGGATGTGAGATGCAGATTTTGCATTTTGATATCAAACCCCATAACATCTTACTAGATGAAAACTTCCTCCCGAAGGTTTCCGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATTGTCACAATGACAGCAGCAAGAGGAACCATTGGATATATTGCTCCAGAATTGTTTTACAAAAATATTGGAAGGATATCTCATAAGGCTGATGTTTATAGCTTTGGAATGCTCTTGATGGAGATGGCAAGCAAGAGGAAGAATCTAAATCCCCATGCAGAGCACTCAAGTCAACTTTACTTCCCCTTTTGGATCTATGATCAGATTAGAGAAGAGAAAGATATAAATATTGAAGATTTGACAGAAGAGGAAAAGAAAATAGCAAGAAAGATGATCATAGTTGCACTTTGGTGCATACAATTGAAACCAAATAATCGTCCGTCAATGAATAAAGTAGTTGAAATGCTTGAAGGAGACATTGAAGACTTGGAAATACCTCCAGAGCCTTCTTTATTTCCAGATGAAATGAATACAGATGGTCAAACAATGAACTCAACATCCACCGACTTCGACACATTCTCCTAA 936 0.3611 MTASFKEKLGEGGFGSVFKGNLRSGPFVAIKMLGKSKGNGQDFISEVATIGRIHHQNVVQLIGFCVSGSKRALVYEFMSNGSLDKLIFSEEGNVHLSYEKIYNISIGMARGISYLHHGCEMQILHFDIKPHNILLDENFLPKVSDFGLAKLYPIDNSIVTMTAARGTIGYIAPELFYKNIGRISHKADVYSFGMLLMEMASKRKNLNPHAEHSSQLYFPFWIYDQIREEKDINIEDLTEEEKKIARKMIIVALWCIQLKPNNRPSMNKVVEMLEGDIEDLEIPPEPSLFPDEMNTDGQTMNSTSTDFDTFS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00638 311 Gene3D Phosphorylase Kinase; domain 1 2 81 - -
Lapu8g00638 311 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 293 IPR045874 GO:0004672
Lapu8g00638 311 SUPERFAMILY Protein kinase-like (PK-like) 5 274 IPR011009 -
Lapu8g00638 311 SMART serkin_6 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00638 311 PIRSF ILK 3 281 - -
Lapu8g00638 311 Coils Coil 227 247 - -
Lapu8g00638 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lapu8g00638 311 ProSiteProfiles Protein kinase domain profile. 3 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00638 311 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Lapu8g00638 311 Pfam Protein kinase domain 5 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00638 311 MobiDBLite consensus disorder prediction 284 311 - -
Lapu8g00638 311 FunFam PR5-like receptor kinase 78 284 - -
Lapu8g00638 311 Gene3D Transferase(Phosphotransferase) domain 1 82 281 - -
Lapu8g00638 311 MobiDBLite consensus disorder prediction 292 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00638 Lapu-Chr8 24154907 24156827 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00638 1 288 Receptor kinase-like Gene Family AT5G38260 52.740 2.39e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu8g00638 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00638 - - vum:124829704 552.747