Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00627 ATGGGAGAAGGAGTTTTGGAGTCATGGACATCAGAAGAGGATAAGAAATTTGAATCTCTACTCAAATTAAATACATCCTCAAATGCTAAAAGTTTTTGGAAGCTTGCCATGAAGAACTTTCCATACAAATCCTTAAAGTCCTTGGTAAGTTACTATTACAATGTATACATCCCAAGACGTTTAAGCATGGAGACAAGATCATCCCGAAATGTAATTGACAGTGACAATGATCAAGATGAGAACTTCAAAAAAGAGAAACATTCATCTACAGGTAGGAACTTCTTATCACTTTATCCTAAACAAGGACTTTGA 312 0.3494 MGEGVLESWTSEEDKKFESLLKLNTSSNAKSFWKLAMKNFPYKSLKSLVSYYYNVYIPRRLSMETRSSRNVIDSDNDQDENFKKEKHSSTGRNFLSLYPKQGL* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00627 103 SUPERFAMILY Homeodomain-like 7 57 IPR009057 -
Lapu8g00627 103 Gene3D - 2 71 - -
Lapu8g00627 103 MobiDBLite consensus disorder prediction 66 103 - -
Lapu8g00627 103 CDD SANT 8 55 IPR001005 -
Lapu8g00627 103 MobiDBLite consensus disorder prediction 70 90 - -
Lapu8g00627 103 PANTHER DNA BINDING PROTEIN 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00627 Lapu-Chr8 24015552 24016129 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu8g00627 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00627 - - pvu:PHAVU_008G107600g 134.035