Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00622 ATGTCTACAGAAGTTATTGCTACTCCTTCAGCTGCTCCTTTTGAGTTTGAGATCTTGGATAGTGATTCTGACATTGTTAGATCTGTTAGAGCCTCATCCAATCGTGCAAATCCATGGATTGAACCTGAAAGGCTGAAACTTAGACACAGAATTGGTCGAGGCCTCTTTGGTGATGTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTACATACAATCGGAGAGGATCATATGAAGATTGTAATAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATGTCCTGGCTGCATGGAATTTCAATCTTAAACGGAAGGATATGCATCATTATGAATTTGTATGATGGTTCAATTGGTGACTTGATGGCCGGACTCAAAGAAGGAAGGATTTCATTGCATGATGTTTTAAGGTATGGAATCAATCTGGCTCAAGGTGTTCTGGAACTTCACTCTCTGGGGATCCTCATTCTTAACCTTAAACCGTTCAATGTTCTTCTCACTGACAAAGATCAAGCAATTTTGGGAGATATTGGAATTGCTAGTCTTTTGCTTGACTCCTCATTCCTAAGCACAGATATGTATAAGAGGCTTGGAACACCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCGTTTGAGACAGATTCTTGGGGATTTGGTTGCACCATTGTCGAAATGTTGACTGGTAATCAACCTTGGTATGGATGTCCTGTTGGCAGAATATACCAGTCAGTTGTTGAAAAGCATGAAAAGCTCAATATTCCTAGTGGACTTCCTTCGTCAGTTGAGAATATCCTCAGTGCATGTTTTGAGTATGATTTGAGGAATCGCCCTTTGATGGTGGATATTCTGAGTGTTTTTCAAAGTGCTCTGAATGAATTGGCCAATGATGGAGAATGGAGATATCTGGGAAATGTGAAAGTTAATCCAAAATCAGATAGCACTGGTTATACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGTGACATGGTCCGAACTAGAAAGCTTCCCAATTCATGCAGTCCTCAAAACAATGATATCCCTGAAGGAACTGTTGTTGGTTTAGAGAGTAACACAGATCACAGGTTCGCCCTAGTGAGGATCCCGGGCAGTGACAACCCTATTAGAGTTCATATGTCATCCATTGAACGTGTCACATCTGGCTTGGTAGCTGGTGACTGGGTTCACTTGAGGGACGAAAATGAGAAGCACTCACCTCTGGGCATTCTACACGCCATCAACCGTGACGGTAGTGTATCTGTTGGATTTCTTGGGCTGCAAACTCTGTGGCACGGAAACTCTTCCGAACTCGAAAAGGTTAAACCTTACTGTGTTGGCCAGTTTGTCAGGATCAAAGACAATGTTTCAAGTCCTCGATTTGAGTGGCGTCGCAAAAAGGGCTGTGCCTGGGCTGCTGGTAGGGTCTCATGGATTCTTCCAAATGGATGTTTGGTTGTCAAGTTCCCAGGAATGCTTCCTTTTGGCAATGAAGCAAGCACCTACTTGGCTGATCCCTCTGAAGTTGAAGTGGTTGAGTTCAGCACTTGTCCTGGGATCATAGAAAAGTATCAACATTTAGAGGATCATCACTGGGCAATTAGACCAGTTCTAGTTGCATTTGGTCTGTTCACTGCTTTCAAATTTGGCATACTTGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTGAATGCAGTGGAAATTGAAAGTCAATATCTTGCTGCTCAAAATCAAAATGCCAACTCTGCTACAACTACTACTGCCACCACAATGAGATCTTCCAGTGCTACAAAACAAGGAACGCCAAATGGATTCCTGCAGTTGCTAATATAA 1902 0.4253 MSTEVIATPSAAPFEFEILDSDSDIVRSVRASSNRANPWIEPERLKLRHRIGRGLFGDVWLATHHQSTEDYDEYHEVAAKMLHTIGEDHMKIVIEKFNELYFKCQGVASMSWLHGISILNGRICIIMNLYDGSIGDLMAGLKEGRISLHDVLRYGINLAQGVLELHSLGILILNLKPFNVLLTDKDQAILGDIGIASLLLDSSFLSTDMYKRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVGRIYQSVVEKHEKLNIPSGLPSSVENILSACFEYDLRNRPLMVDILSVFQSALNELANDGEWRYLGNVKVNPKSDSTGYTEWFLSKDHLQVGDMVRTRKLPNSCSPQNNDIPEGTVVGLESNTDHRFALVRIPGSDNPIRVHMSSIERVTSGLVAGDWVHLRDENEKHSPLGILHAINRDGSVSVGFLGLQTLWHGNSSELEKVKPYCVGQFVRIKDNVSSPRFEWRRKKGCAWAAGRVSWILPNGCLVVKFPGMLPFGNEASTYLADPSEVEVVEFSTCPGIIEKYQHLEDHHWAIRPVLVAFGLFTAFKFGILVGKKVRRNNKVNAVEIESQYLAAQNQNANSATTTTATTMRSSSATKQGTPNGFLQLLI* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00622 633 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Lapu8g00622 633 Gene3D Transferase(Phosphotransferase) domain 1 131 336 - -
Lapu8g00622 633 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00622 633 SUPERFAMILY Protein kinase-like (PK-like) 42 309 IPR011009 -
Lapu8g00622 633 Gene3D Phosphorylase Kinase; domain 1 22 104 - -
Lapu8g00622 633 ProSitePatterns Protein kinases ATP-binding region signature. 51 80 IPR017441 GO:0005524
Lapu8g00622 633 PANTHER OS06G0639500 PROTEIN 1 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00622 Lapu-Chr8 23893064 23897333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00622 48 299 MAP Kinase Kinase Kinase AT2G32510 28.736 1.60e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lapu8g00622 PK_Tyr_Ser-Thr 1.3e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00622 8 23893064 23897333 Lapu8g00622 8 23893064 23897333 ECH