Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00615 ATGGTACAAGCAAAGAAGTTCAGAGGAGTAAGGCAACGCCAATGGGGCTCATGGGTCTCAGAAATTCGTCACCCTTTACTGAAGAGAAGGGTGTGGCTAGGGACATTCGAGACAGCAGAAGCTGCAGCAAGGGCATATGATCAAGCAGCCATTTTGATGAGTGGTCAAAATGCAAAGACCAATTTCCCTGCACCACCATTGAACCAGTCTCAAGGTGCCACCACTTCCACTCCTTGTGAAGACCCTTTCTCATCTCCCAGCGTTCTTTCTGAGCATCTGAGTAAAAAGCTGAAGAGGTGCTGCAAAGGCCCTCCTCCATCCCTCACATGTCTGAGGTTAGATGCTGACAATTCCCACATTGGAGTGTGGCAAAAGGGTGCAGGACCACATTCAGACTCCAACTGGATTGTGAGGGTGGAGCTTGGGAAGAAACATAATTTG 441 0.4898 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMSGQNAKTNFPAPPLNQSQGATTSTPCEDPFSSPSVLSEHLSKKLKRCCKGPPPSLTCLRLDADNSHIGVWQKGAGPHSDSNWIVRVELGKKHNL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00615 147 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Lapu8g00615 147 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Lapu8g00615 147 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 126 - -
Lapu8g00615 147 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Lapu8g00615 147 MobiDBLite consensus disorder prediction 62 84 - -
Lapu8g00615 147 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Lapu8g00615 147 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Lapu8g00615 147 CDD AP2 5 64 IPR001471 GO:0003700|GO:0006355
Lapu8g00615 147 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Lapu8g00615 147 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Lapu8g00615 147 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00615 Lapu-Chr8 23775472 23776594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00615 1 146 AP2-EREBP Transcription Factor Family AT5G25390 65.068 7.72e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu8g00615 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00615 - - gmx:100784305 261.536