Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00604 TCCGTAATGGAGGCCGCCTTTCGTCCCCCGACGCCGCAATCTACCACGTCAAGTGTCACTCCGCCGCTGCTCCAATCCCAGTTTCTCCCCGATCAGACTTCCCTCCAACGGCGGTTTCAGACGCTACTTGAAGGTGCTGAAGAGAGGTGGATGTATGCAATTTACTGGGAGTGTTCTCACAACCACTCCTCTGCCGCTTCCATTCTCAGTTGGGGTTACGGCTATTACAACGGCAATGGCGAAGCCGAAAAAGCGATGTCGTTCGCGGAACAGGCCCACCGCAAGAACATTTTAAGGACACTCAATTCCATAATTTTTGGCCCCTCGTCCACTGAAGATGACTGCAACGAAGACATCACTGACCCAGAGTGGTTCTTTTCGCTGTCCATGCTTCACAACTTTGTCAACGGCACCGGCGGCCTGCTGGGCCAGGCTTTCTTTAATTCGAGCCCAGTTTGGGTCACCGGCTCAGACCGTTTATCTGAATTGGCCTGCCAACGAGCGCGGCGGTTACCGGAGATTGGGCTTCAGACTATGGTTTGTATACCGTGTCAAAACGGCGTCGTTGAGCTTGTCTCCACTGAAGTGGTTCTACCCAACCAAGATCTCATTATCAAAGTGCGAGATTTGTTCAACTTCAACCACCCAGTTGCGGACCTGCCCTCTAGCGAAATCATGCAACCACGAGAAGATAAGATGTTGCATGAAAGAGAAAGTGTTGAGATGCAAAATGATGAAAGAGAGAAGCTGTCTAAGCAATGTCGAGGAAAGGAAAAGATGAGTGATTCAAAATGCTCATGGTTGTTGTTATCAGAAAGTTCTGAGGGAGGCTCTGATACCACGTATTCACATTCTTATGACTATTCTGGGCCCTCCTGA 879 0.5006 SVMEAAFRPPTPQSTTSSVTPPLLQSQFLPDQTSLQRRFQTLLEGAEERWMYAIYWECSHNHSSAASILSWGYGYYNGNGEAEKAMSFAEQAHRKNILRTLNSIIFGPSSTEDDCNEDITDPEWFFSLSMLHNFVNGTGGLLGQAFFNSSPVWVTGSDRLSELACQRARRLPEIGLQTMVCIPCQNGVVELVSTEVVLPNQDLIIKVRDLFNFNHPVADLPSSEIMQPREDKMLHERESVEMQNDEREKLSKQCRGKEKMSDSKCSWLLLSESSEGGSDTTYSHSYDYSGPS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00604 292 MobiDBLite consensus disorder prediction 238 263 - -
Lapu8g00604 292 MobiDBLite consensus disorder prediction 1 23 - -
Lapu8g00604 292 MobiDBLite consensus disorder prediction 238 262 - -
Lapu8g00604 292 MobiDBLite consensus disorder prediction 273 292 - -
Lapu8g00604 292 PANTHER MYC 26 251 IPR045084 GO:0003700|GO:0006355
Lapu8g00604 292 MobiDBLite consensus disorder prediction 8 23 - -
Lapu8g00604 292 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 35 211 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00604 Lapu-Chr8 23663509 23664870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00604 1 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 43.162 2.80e-52 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00604 K13422 - pvu:PHAVU_001G052400g 308.531