Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00603 ATGGAGGCCTTTCGTCCCCCGACACCGCAATCCGCCAAGTCAAGCGTCACTCCGTCGCTGCTCCCATCACAGTTTCTCATCGATCAGAGTTCCCTCCAGCGGCGGTTTCAGATGCTACTTGAAGGTGTTAGAGAGAAGTGGATGTATGTAATTTACTGGCAGTGTTCTTCTCACAACCATTCTTCTGCCGCTTCCCTTCTCAGTTGGGGTGACGGCTATTACACCGGTAATGGCAAAGCCCAAAAAGCGACGTCGCCGGCAGTACAGGCCCACCGCAAGAACATTTTTAGGACACTCAATTCCTTAATTTCTGGCCCCTCGCCCACCGATGATGACTGCGACGAAGACGTCACTGACCCAGAGTGGTTCTTTTTGGTGTCCATGACTGAAACCTTTGTCAACGGCACCGGCGTGCTGGGCCAAGCTTTCTTTAATTCAAACCCGGTTTGGGTCACCGGCTCAGACCGTTTATCTGAAGTGGTCTGCCAACGGGCCCGGCGATTTCCGGAGATTGGGCTTCAGACTATGGTTTGTATACCGTGTCCAAACGGCGTCGTTGAGCTGGCCTCCACTGAAGTGGTTCTACCCAACTCTGATCTCATTATCAAAGTGCGAGATTTGTTCAACTTCAACCACCCAGTGGCGGACCTGCCCTCTAGCGACATCATGCAACCACGGGGAACTTATGAGTACTTATGGCTGCCCAACCCTTGGGGACTTACTTTTGCCTCAACTTCTCAACCCTCCAGCCTAGACACAGATTTTGGAAAAGGTTTCAAAATATTGGTACTTGGCGTTGTTATGCTACTGTGA 813 0.5141 MEAFRPPTPQSAKSSVTPSLLPSQFLIDQSSLQRRFQMLLEGVREKWMYVIYWQCSSHNHSSAASLLSWGDGYYTGNGKAQKATSPAVQAHRKNIFRTLNSLISGPSPTDDDCDEDVTDPEWFFLVSMTETFVNGTGVLGQAFFNSNPVWVTGSDRLSEVVCQRARRFPEIGLQTMVCIPCPNGVVELASTEVVLPNSDLIIKVRDLFNFNHPVADLPSSDIMQPRGTYEYLWLPNPWGLTFASTSQPSSLDTDFGKGFKILVLGVVMLL* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00603 270 PANTHER MYC 26 212 IPR045084 GO:0003700|GO:0006355
Lapu8g00603 270 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 32 208 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00603 Lapu-Chr8 23657445 23659271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00603 21 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 49.761 1.14e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00603 K13422 - pvu:PHAVU_001G052400g 257.684