Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00598 ATGGCAAAGAAGAAGAATTCTCTGGTGTTTATGGATGTGTCCATAGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTATTCTATGATGTTGCTCCGAAGACTGCTGAAAATTTCCGTGCATTATGTACAGGAGAAAGGGGAGTTGGTCCAAATACCAGAAAATCACTGCACTACAAGGGTTCTTTCTTTCATCGAATTGTGAAAGGCTCCATTGCCCGGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAAGCTAAAGCATGATGCTCCAGGCCTTCTTTCCATGCCAGTTGCTGATCGTGACACTCTTGGTTCTCATTTTATCATCACTTTTAAAGCTGATCCACATCTTGATAGGAAACATGTAGTCTTTGGCAAGCTTGTAATAGGGCATGATATATTGAAGAAAATTGAAGATGTGGGTGATAAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGAAAAGAGGATAAATAAATCAAAAAAGGGAAGAGATGGATCTTCTGAAACCAATAGTCATGAACTGCACAAGGGAAAGCACCGGAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCCGATAGTTCCTCAGATTCAGACACAAAATCTTCAGAAAGTGATAGTGATTCTGAGTCTGATATATCTTCATCATCTTTCACAAGTTCCTCCAGTGATGATAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAGACATAGACGTGGAAAAAGAAGAGATAAACACCGAGAGAAGAGACGAAGGAAACAAGATAAAAGATCAAAGCATAGGTCAAGAAGGGAATTGCCCAGTCATACTGATTCAGATAGTGAAAGTAAGAGCAACAACTGCTCTGATAGTGAAAGTTGTGGTGCTGAAGTGAATGATCAGAATCATGAAGACCATTCTCAGAAACATGCTGAAGGTCAGTCTTCCTCAGTTGTCGAGAAAGAATCACCTCCAATGCACCCTAAAAGGAGGGAGAAACTGGATATTCTAGAAGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGCGTAGCAATGGCACTGGAGCCAACCATAGACCTGAAAGAAGTGAAGGGAGGCAGCCTGATGTGGTGGATGATGAACCAGGCAAATCTAGGAGTCAAAGCACGAGTATTAGTCCCAGGTGCAAGAGCAAAAGCCCGAGCATTAGTCCAAAAAGGAGGTCGAGCAGAAGTCCAAGTGGCAGTAGAAGTCCTCATGCTCCATTACAAAGGAGTTTGAACCAGAGTCCTGTTAGAAGCACAAGGAGGAGTCCAAACAGAAGAAGCATCAGCAGAAGCCCAATGAGAGGTAGGAAAGGGAGAAGTATCAGTAGAAGCTCTGTGAGATCTCGTGGACATCGAAGTGTAAGCACAAGCCCTATTAGACCCCTTTCTCGGAGCTACCAGAGGACTTCACCAATACGAAGATCAATCAGCAGAAGCCCTGCAAGATCTCATGGTCGAAGAAGTGTCAGTGCAAGCCCAGGAAGATCCCCTTCACGGGGCCAAAGGAGGAGTTCACCCAGAGCACTATCACGAAGATCAATCAGCAGAAGCCCAGTGAGAAATCGCCAACATAGAAGTGTCAGTAGAAGCCCTGTAAGATCTCGCAGTCATAGAAGTGTTAGTGGAAGCCCTGTAAGATCCCTTTCTCCGAACCATCAGATATCACCCAGAGCAAAATCTCGCAGATCAATCAGCAGAAGTCCTGTGAGAACTCACAATCATAGAAGTGTCAATAGAAGCTCATTGAGAACTCGTGGTCATAGACCTGGCAGTGCAAGCCCTGAAAGATCCCTTTCTCGAAGCGGTGGCCAGAGGAATTCTCCCAGAGCACCATCATGGAGATCAATCAGTAGAAGCCCTGTGAAAACTGACAATCAAAGAAGTGTAAGTGGAAGCCCTTTGAGATCTCATGGTCACAGAAGTGCGAGTGCAAGCCCTGTTAGATCACCTTCATGGGACCGCAGAAGGAGTTCACCCAGAGCACCATCACGAAGATTGATCAGTAGAAGCCCGGTAAGAGTGTCAAGAAAGAGTATAAGCAGGAGTCCAGTTAGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCATTAGCCGGAGTCCAGTTAGAGCACCAAGCAGAGTCAATCGCCGCAGTTATTCTAGGAGTCCTCGTGGTAGGAGCTTGTCTAGGAGTGTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCGTCTCGATCTCCTGTGAGATCATTCCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCCAGGCGGAACAGGAGCCCACCACTACGTAGAAGGACCCCACCAAGGTTCCGGAGTAGGAGGAGCAGGACACCATCTGTATCACGCAGCCCACGTTACCGAGGTCGACGATATAGCCGAAGCCGTAGTCCTGTCCGCAGTCGTTCACCTGTTGGCACATATCGACCTCGTGTTGAGAGGAGCAGGTCTTTGTCCCGGAGCAGGAGTCCATCACGATCCAGGGCTTCAGGGGAATCACAATCTCCACGAAAGAACAGCAGATCAAGGTCAAGGTCCCGGTCTGAAAGCTCTGATGGAAAGAAAGGGCTTGTATCTTACGGAGATGGTTCTCCAGATTCGAACTAA 2805 0.4613 MAKKKNSLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGPNTRKSLHYKGSFFHRIVKGSIARGGDFVNRNGTGGESIYGSKFPDESPKLKHDAPGLLSMPVADRDTLGSHFIITFKADPHLDRKHVVFGKLVIGHDILKKIEDVGDKEGLPSVTVKIINCGEHNEDEKRINKSKKGRDGSSETNSHELHKGKHRKSSGDKRKRRKYYSSESDSSSDSDTKSSESDSDSESDISSSSFTSSSSDDRRRKRKRSRKDRHRRGKRRDKHREKRRRKQDKRSKHRSRRELPSHTDSDSESKSNNCSDSESCGAEVNDQNHEDHSQKHAEGQSSSVVEKESPPMHPKRREKLDILEEEEFPKENGERRSNGTGANHRPERSEGRQPDVVDDEPGKSRSQSTSISPRCKSKSPSISPKRRSSRSPSGSRSPHAPLQRSLNQSPVRSTRRSPNRRSISRSPMRGRKGRSISRSSVRSRGHRSVSTSPIRPLSRSYQRTSPIRRSISRSPARSHGRRSVSASPGRSPSRGQRRSSPRALSRRSISRSPVRNRQHRSVSRSPVRSRSHRSVSGSPVRSLSPNHQISPRAKSRRSISRSPVRTHNHRSVNRSSLRTRGHRPGSASPERSLSRSGGQRNSPRAPSWRSISRSPVKTDNQRSVSGSPLRSHGHRSASASPVRSPSWDRRRSSPRAPSRRLISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRAPSRVNRRSYSRSPRGRSLSRSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSFRYNGRSDRDRYSGYRRYSPRRNRSPPLRRRTPPRFRSRRSRTPSVSRSPRYRGRRYSRSRSPVRSRSPVGTYRPRVERSRSLSRSRSPSRSRASGESQSPRKNSRSRSRSRSESSDGKKGLVSYGDGSPDSN* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00598 934 MobiDBLite consensus disorder prediction 176 201 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 823 847 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 742 768 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 402 463 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 296 310 - -
Lapu8g00598 934 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lapu8g00598 934 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lapu8g00598 934 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lapu8g00598 934 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lapu8g00598 934 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lapu8g00598 934 MobiDBLite consensus disorder prediction 176 934 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 803 818 - -
Lapu8g00598 934 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 215 239 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 628 686 - -
Lapu8g00598 934 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 888 903 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 464 480 - -
Lapu8g00598 934 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 348 401 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 481 550 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 258 295 - -
Lapu8g00598 934 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lapu8g00598 934 MobiDBLite consensus disorder prediction 904 918 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 567 596 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 322 336 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 707 735 - -
Lapu8g00598 934 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Lapu8g00598 934 Gene3D - 1 175 IPR029000 -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 597 616 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 770 790 - -
Lapu8g00598 934 MobiDBLite consensus disorder prediction 551 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00598 Lapu-Chr8 23578447 23585705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00598 25 170 U-box Gene Family AT5G67530 39.865 2.75e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00598 K09566 - rcu:8278566 543.117