Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00597 ATGGCAAAGAAGAAGAACTGTTTGGTGTTTATGGATGTGTCCATAGATGGGAATCCTGTTGAAAGGATGGTTTTTGAGCTCTTCTATGATGTTGCTCCAAAAACTGCTGAAAATTTCCGTGCATTATGCACAGGAGAAAGGGGTGTTAGTCCAAGTACTGGAAAATCACTGCACTACAAGGGATCTTTCTTCCATCGAATTGTAAAAGGATCCATTGCCCGGGGTGGTGATTTTGTGAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTTCCAGATGAATCACCTAGGCTGAAGCATGATGCTCCCGGCCTTCTATCTATGCCTGTTCCTGTTCGTGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGACCTCCATCTTGATAGGAAACATGTGGTCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCGAGTGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGGGGACAGAAAGAAGATAAGGAAATCAAAAAAGGGAAGAGATGGGTTTCCTGAAACCAATAGTCATGAACTACGTAGGGGGAAGAACAAAAAATCTTCAGGAGACAAAAGGAAAAGGAGAAAGTACTACACATCAGAATCTGATAGTTCCTCAGATTCAGACACGAAATCTTCAGAAAGTGATTATGATTCTGACTCAGATACATCTTCATCATACACAAGTTCCTCAAGTGATGACCGGCGGAGAAAGAGAAAGAGATCCAGGAAAGATAAGCGTAGAAGTGGAAAAAGAAGAGACAAACATAGAGAGAAGAGACGAAGGAAACAAGACAAAAAATCAAAGCGTAGACTGAGAAGGGAATTGACCAGTCTTACTGATTCAGATAGTGAAAGTAAGAGTGGCAGTAGCTCCGATGGGGAAAGTTGTGGTGCTCAAGCAAAAGATCGGAAGCATAAAGATCAATCTCAGGGACATGCTGAAGCTCAGCATTCCTTGGTTGTGGAGAAAGAATTACCTCCCATGCACCTTAAAAAGGAGAAACTGGATATGCTAGAGGAAGAAGAATTCCCAAAGGAGAATAAAGAGCAGTGTAGCAATGGCACTAGACCCAACTATAGATCTGACAAAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCGACCAGGCAAATCTAGGAGTCAAAGCATGAGTATTAGTCCCCGGAGCAAGAGGAAAAGCCCAAGTAGTCCCAAAAGGAGGTTGAGAAGAAGTCCAAGTGGCAGTGGAAGCCCTCGTGCACCATCACAGAGGAGTTTGAGTCAGAGTCCTGTTAGAAGCAAAAGTCCAAACAGAAGAAACATCAGTAGAAGCCCAGTGAGTGGTAGGAAGGGGAGAAGTTTCAGTAGAAGCCCTGTGAGATCTCCTGGACATAGAAGTGTTAGTGCAAGCCTTGTAAGATCCCTTTCTCAGACCCACCATAGTACTTCACCTAGATCAGCATCACGAAGATCAATCAGCAGAAGTCCTGGAAGATCCCTATCTCGGATTCACGGGAGGAGTTCACACAGACTACCAGCACGAACATCAACCAGCAGAAGCCCTTTGAGAAATCATAATCATAGAAATGTCAGTAGAAGCCCTGTGCGATCTAGTGGTCGTAGAAGTGTGAGTGCAAGTCCTGTAAGATCCCTTTCTCGGAGCCACCGGAGTTCACCCAGAGCATTGTCACGAAGATCAATCAGCAAAAGCCCGATGAGAACTCTCAATCATAGAAGTGTAAATAGGAGCCCTATGAGATCCCCTGGTCATAGAAGTATCAGTGAAAGCCCTATAAGATCTCTTTCTGAGAGCTGTTGGAAGAGTTCATCAAAAGCACAGTCACGAAGATCAATCAGTAGAAGCCCTGTGAGAACTGACAATCATAGTAGTGTAAGTAGAAGCCCTGTGAGATCTCATGGTCGTAGAAGTGTGAGTGCAAGCCCTGTCAGATCGATTTCTAGGGGCCGCCGAAGGAGCTCACCAAGAGCACCATCACAAAGATCAATAAGTAGAAGCCCGGTAAGAGTTTCAAGAAAGAGTATAAGCAGGAGTCCAGTTAGATCATCTGCTAGAAGCTCTGGCAGAATTCCTCCCAGAAGCATTAGCCGAAGTCCAGTTAGAGTGCCAAGCAGAGGCAATCTTCGAAGTTATTCTAGGAGTCCTCGCAGGAGCTTGTCTAGAAGTGTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGTGGTTTCGGTGATCGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGATCATATCGCTATAATGGAAGAAGTGACCGTGACAGATATTCAGTTTACAGAAGGTACTCACCTAGGCGGAACAGGACCCCACCACCACGTAGAAGAACCCCACCAAGGTTCCGGAGTAGGAGGAGCAGGACACCATCTGTATCACGCAGCCCACGTTATCGAGCTCGACGATATAGTCGAAGCCGCAGCCCTGTCCGCAGTGGTTCACCTGTGGGAAGTAGGTCTTTGTCCCGGAGCCTGAGTTCATCACGATCCAGGGCTTCTGTGGAATCACAATCTCCACGAAATGCAGGCAGGAACAGCAGGTCAAGGTCCCCGTCGGAAAGCTCAGATGGAAAGAAAGGCCTTGTATCTTACGGAGATGGTTCTCCCGAGTCAGAGTAG 2721 0.4546 MAKKKNCLVFMDVSIDGNPVERMVFELFYDVAPKTAENFRALCTGERGVSPSTGKSLHYKGSFFHRIVKGSIARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVPVRDTLGSHFIITFKADLHLDRKHVVFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNGDRKKIRKSKKGRDGFPETNSHELRRGKNKKSSGDKRKRRKYYTSESDSSSDSDTKSSESDYDSDSDTSSSYTSSSSDDRRRKRKRSRKDKRRSGKRRDKHREKRRRKQDKKSKRRLRRELTSLTDSDSESKSGSSSDGESCGAQAKDRKHKDQSQGHAEAQHSLVVEKELPPMHLKKEKLDMLEEEEFPKENKEQCSNGTRPNYRSDKSEGRQPDVMDDRPGKSRSQSMSISPRSKRKSPSSPKRRLRRSPSGSGSPRAPSQRSLSQSPVRSKSPNRRNISRSPVSGRKGRSFSRSPVRSPGHRSVSASLVRSLSQTHHSTSPRSASRRSISRSPGRSLSRIHGRSSHRLPARTSTSRSPLRNHNHRNVSRSPVRSSGRRSVSASPVRSLSRSHRSSPRALSRRSISKSPMRTLNHRSVNRSPMRSPGHRSISESPIRSLSESCWKSSSKAQSRRSISRSPVRTDNHSSVSRSPVRSHGRRSVSASPVRSISRGRRRSSPRAPSQRSISRSPVRVSRKSISRSPVRSSARSSGRIPPRSISRSPVRVPSRGNLRSYSRSPRRSLSRSVSPDVSPKRIRRGSGFGDRYSYARRYRTPSRSPVRSYRYNGRSDRDRYSVYRRYSPRRNRTPPPRRRTPPRFRSRRSRTPSVSRSPRYRARRYSRSRSPVRSGSPVGSRSLSRSLSSSRSRASVESQSPRNAGRNSRSRSPSESSDGKKGLVSYGDGSPESE* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00597 906 MobiDBLite consensus disorder prediction 802 826 - -
Lapu8g00597 906 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 346 371 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 400 414 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 475 518 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 547 670 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 526 540 - -
Lapu8g00597 906 SUPERFAMILY Cyclophilin-like 5 179 IPR029000 -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 782 797 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 187 206 - -
Lapu8g00597 906 Gene3D - 1 175 IPR029000 -
Lapu8g00597 906 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lapu8g00597 906 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lapu8g00597 906 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lapu8g00597 906 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lapu8g00597 906 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 215 239 - -
Lapu8g00597 906 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lapu8g00597 906 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Lapu8g00597 906 MobiDBLite consensus disorder prediction 841 884 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 382 399 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 257 291 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 303 318 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 319 334 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 722 747 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 177 906 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 423 467 - -
Lapu8g00597 906 MobiDBLite consensus disorder prediction 678 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00597 Lapu-Chr8 23564492 23575572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00597 25 170 U-box Gene Family AT5G67530 39.865 1.17e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00597 K09566 - gmx:100801588 636.721