Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00596 ATGGCAAAGAAGAAGAATTGTCTGGTGTTTATGGATGTGTCCATTGATGGGGATCCGGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCGAAGACTGCTGAAAATTTTCGTGCATTATGTACAGGAGAAAGAGGAGTCGGTCCAAATACTGGAAAGTCGCTGCACTACAAGGGTTCTTTCTTTCATCGAATTGTAAAAGGCTCCATTGCCCGGGGTGGAGATTTCGTCAATCGAAATGGGACTAGTGGAGAAAGCATATATGGTTCTAAGTTCCCAGATGAATCACCTAGGCTAAAGCACGATGCTCCAGGCCTTCTTTCCATGCCAGTTGCTGATCGTGACACTCTGGGTTCTCATTTTATCATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAAAATGTAATCTTTGGTAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAGTCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGACGGAAAGAAAATAAATAAGTCAAAAAAGGGAAGAGATGGATCTAATGAAACCAATAGTCCTGAACTGCGTAGGGGAAAGAACAAAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCGAATAGTTCCTCAGATTCAGACTCAGAATCTTCAGAAAGTGATAGTGATTCTGAATCAGATATATCTTACACAAGTTCCTCCAGTGATGACAGGCGAAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACATGGAAAAAAGAGAGACCAATACCGAGAAAAGAGACGAAGGAAACAAGAGAAAAGATCAAAGCGTAAATCAAGAAGGGAATTGACCCATCATACTGATTCAGATAGTGATAATAGGAGTGGCAACAGCTCTGGTGGTGAAAGTTACGATGCTCAAGCAAACAATCAGAAGCATAAAGATCATTCTCAGAAACATGCTGAAGGTCAGTCTTCCATGATTGTGGAGAAAGAATTACCTGCCGTGCTCCTTACAAAGGGGGAGAAACTGGATATGCTAGAGGAGGAAGAATTTCCCAAGGAAAATGGAGGGAGGTGTAGCAATGGCAATGGAGCCAACTATAGATCTGATAGAAGTGAAGGGAGGCAACCTGATGTGATGGATGATCAACCAGGCAAATCTAGGAGTCAAAGCATGAGTATTAGTCCAAAGCGTGAGAGCAGAAGTCCAAGCTTTAGTCGAAAAAGGAGGTTGAGCAGAAGTCCTAGTGGCAGTAGAAGCCCTTGTGCTCGATTACAGAGGAGTTTGAGCAGGAGTCCAAACAGAAGAACCATCAGCAGAAGCCCAGTGAGAGGTAGAAAGGGAAAAAGTGTCAGTAGAAGCCCTGTGCGATCTCATGGATATAGAAGTGTCAGTGCAAGCCCTGTTAGATCCCTTTCTCGGAGCCACCAGAGGACCTCACCCAGAGTACCATCACGAAGATCAATCAGCAGAAGCCCTGTTAGATCTCGTGATCATAGAAGTGTCAGTGTAAGCCCAGTAAGATCCCTTTCTCGGAGCCACAAGAGTTCACCCAAAGCACGATCACAAAGATCGATCAGCAGAAGCCCTGTGAGAACACACAATAATAGAAGTGTCAATAGAAGCCCTGTGAGATCTAGTGGTTGGAGAAGTGTTAGCGTAAGCCCTGTAAGATCCCCTTCTTGGAGCCGTAGGAGGAGTTCACCCAGAGCACTATCTCGAAGATCAATCAGTAGAAGCCCAGTGAAAACTGATAATCATAGAAATGTAGGTAGAAGCCCTGTGAGATCTCATGGTCGTAGAAGTGTGAGTGCAAGCCCTGTAAGATCGCTTTCTCGGGGTCACCGGAGGAGTTCACCCAGGGCACCATCCCGAAGATCAATCAGCAGAAGCCCTGTAAGAGTGTCCAGAAAGAGCATAAGCAGGAGTCCGGTTAGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTAAGAAGTATTAGCCGAAGTCCAGTTAGAGTGCCAGGCAGAGGCAATCGCCGCAGTTATTCAAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTGTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACAATACTCCTATGCTAGAAGGTACAGAACTCCCTCTCGATCTCCTGTGAGGTCATACCGCTACAATGGAAGAAGTTACCGTGACAGATATTCAGGTTACAGGAGGTACTCCCCCAGGCGTAATAGGAGCCCACTGCGACGTAGAAGAACTCCACCAAGGTTCCGGAGGAGGAGCAGGACATCATCTGTATCACGGAGCCCACGTTATAGAGGTCGACGATATAGTCCCAGCCGCAGCTGTAGCCCCGTTCGCAGTCGTTCACCTGTTGGTACATATCGGCCTCGTGTTGGGAAGAGCCGGTCTTTGTCCCGGAGTAGGAGTCCATCAAGATCCAGGGCTTCAGTGGAATCACCACGAAAGGCGAGCAGGAACAGCAGGTCAAGGTCTCCGTCTGAAAGCCCAGATGCAAAGAAAGGCCTTGTATCTTACGGAGATGGTTCTCCGTATTCAAAATAA 2625 0.4575 MAKKKNCLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGPNTGKSLHYKGSFFHRIVKGSIARGGDFVNRNGTSGESIYGSKFPDESPRLKHDAPGLLSMPVADRDTLGSHFIITFKADPHLDRKNVIFGKLVQGHNILKKIEDVGDEEGLPVVTVKIINCGEHNEDGKKINKSKKGRDGSNETNSPELRRGKNKKSSGDKRKRRKYYSSESNSSSDSDSESSESDSDSESDISYTSSSSDDRRRKRKRSRKDKHRHGKKRDQYREKRRRKQEKRSKRKSRRELTHHTDSDSDNRSGNSSGGESYDAQANNQKHKDHSQKHAEGQSSMIVEKELPAVLLTKGEKLDMLEEEEFPKENGGRCSNGNGANYRSDRSEGRQPDVMDDQPGKSRSQSMSISPKRESRSPSFSRKRRLSRSPSGSRSPCARLQRSLSRSPNRRTISRSPVRGRKGKSVSRSPVRSHGYRSVSASPVRSLSRSHQRTSPRVPSRRSISRSPVRSRDHRSVSVSPVRSLSRSHKSSPKARSQRSISRSPVRTHNNRSVNRSPVRSSGWRSVSVSPVRSPSWSRRRSSPRALSRRSISRSPVKTDNHRNVGRSPVRSHGRRSVSASPVRSLSRGHRRSSPRAPSRRSISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRVPGRGNRRSYSRSPRGRSLSRSVSPDVSPKRIRRGRGFSEQYSYARRYRTPSRSPVRSYRYNGRSYRDRYSGYRRYSPRRNRSPLRRRRTPPRFRRRSRTSSVSRSPRYRGRRYSPSRSCSPVRSRSPVGTYRPRVGKSRSLSRSRSPSRSRASVESPRKASRNSRSRSPSESPDAKKGLVSYGDGSPYSK* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00596 874 MobiDBLite consensus disorder prediction 428 452 - -
Lapu8g00596 874 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lapu8g00596 874 MobiDBLite consensus disorder prediction 176 206 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 762 786 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 612 626 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 396 413 - -
Lapu8g00596 874 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 469 503 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 839 856 - -
Lapu8g00596 874 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lapu8g00596 874 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lapu8g00596 874 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lapu8g00596 874 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lapu8g00596 874 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lapu8g00596 874 MobiDBLite consensus disorder prediction 305 319 - -
Lapu8g00596 874 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 359 874 - -
Lapu8g00596 874 SUPERFAMILY Cyclophilin-like 5 176 IPR029000 -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 255 293 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 637 675 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 535 592 - -
Lapu8g00596 874 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Lapu8g00596 874 Gene3D - 1 175 IPR029000 -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 176 343 - -
Lapu8g00596 874 MobiDBLite consensus disorder prediction 824 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00596 Lapu-Chr8 23538941 23546491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00596 25 170 U-box Gene Family AT5G67530 37.838 1.15e-18 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00596 K09566 - gmx:100801588 701.049