Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00592 ATGGAACCTTTTGTTGGAATTACTCAAGATTTCAAAGGAAGGGTTGCATGTTACAAACACGATTGGACCAGTGCATTCTTTTCTGGCATCAAGATACTGGCTCCAACTTTCTACATATTCTTCGCTTCAGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAACAGGGATACAGGTGGAAGCTTGAGCACAGTAGAAACATTGTCATCAACTGCTATTTGTGGAATTATCCACTCAATATTTGGTGGTCAGCCTATGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTCTATCGGTTTTGCGTAAAAAGTCCAGATCTAGGTGTCCAGATGTTTCTTCCTTGGGCTGGCTGGGTTTGTGTGTGGACATCTTTCTTGCTGATTATGCTTGCAGTTTTCAACGCCTGCAATATTATCACGAGGTTCACAAGAATAGCAGAGGAACTATTTGGCATGTTAATTACTGTCCTTTTCTTCCAAGAGGCTATAAAGGGAATAAAGAGTGAGTTTGAAATACCCAAATCTGAAAATCCTTTCGCTGAGGAACATAAATTCTATTGGCGGTATACAAACGGACTACTTGCAGTCATTTTCTCTTCTGGAATAGTTCTCACTGCCAGGATGAGCAGAACAGCAAGAACATGGAGATATGGAACAGGGTGGCTACGAGCTTTCATTGCAGACTATGGGATTCCAGTGATGGTTGTGATTTGGACTGCACTATCATATACTGTACCAAGCGAAGTTCCAGCTGCTGTTCCTAGAAGGCTGGTTTGTCCACTTCCCTGGGAATCTGCTTCTCTCTACCACTGGACAGTAATAATGGATATGGGAAAGGTACCCGTGGTTTACATCTTTGGAGCATTTATTCCAGCTGTGATGGTAGCAAGTTTATACTTCTTTGATCATACTGTAGCTTCTAAGATGGCACAACAGAAGGAATATAATCTTCAAAAACCTAGTTCTTACCACTATGATTTGTTCCTTCTTGGTATAATGACTCTGATTTGCGGTTTACTTGGTCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACTAAAAGTTTGGCAGTTCTTAGGAGGCAGATGATCCGAAAGAAAGTGGTAAAAAGTGCCAAGGATTGCATTAAGCAACAAGGAAGCACCAATGAATTATATGGGAAGATGCAAGCCGTGCTTGTAGAAATGAATTCTGAACCAAATAGTAAAGAGTTGAAGAATTTGAAGGAGGCTGTAATGAAATCTACTGAAAATAATGGTGAAAAGATAACATTTGATCCTGAAAAACACATTGATGCATATATACCTGTCCGTGTTAATGAGCAAAGACTGAGTAACTTATTACAGTCTATCCTGGTTGGCCTATCAATTTTTTCCATTTCTGTCATCAAGATGATACCAACTTCAGTTCTGTGGGGCTATTTTGCATACATGGCAATTGATAGTCTCCCAGGGAATCAATTCTGGGAAAGGATATTGTTTCTCTTCATCTCACCAAGCCGGCGCAACAAAATGTTGGAAGGGCCTCATGCCTCGTTTGTGGAATCAGTGCCATTCAAGACCATAGCCATATTCACAATCTTTCAGTGTGTTTACTTTTTAGTATGTTATGGGGTGCAATTGATACCTGTAGGAGGAATACTTTTCCCATTACCTTTCTTCCTTCTCATACCTATAAGAGAGCACTTGCTTCCATACTTATTCAAGCCTATCGATCTTCAAGAACTAGATGCTGCTGAGTACGAGGAAATTCTTGGAGTTCCAAAGTCGATGCATATAAATGATGATGACAGCAACGCAGAAGATTATTACGACGCAGAGCTATTGGATGAAATGACAACTCACAGGGGAGAACTGAAGCTTAGAACCGTAAGCCAAATTAACAGAAACTTCACTGAAGGCATGCATCAGACAGATATTTATTTTTAA 1953 0.4035 MEPFVGITQDFKGRVACYKHDWTSAFFSGIKILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTVETLSSTAICGIIHSIFGGQPMLILGVAEPTVIMYTILYRFCVKSPDLGVQMFLPWAGWVCVWTSFLLIMLAVFNACNIITRFTRIAEELFGMLITVLFFQEAIKGIKSEFEIPKSENPFAEEHKFYWRYTNGLLAVIFSSGIVLTARMSRTARTWRYGTGWLRAFIADYGIPVMVVIWTALSYTVPSEVPAAVPRRLVCPLPWESASLYHWTVIMDMGKVPVVYIFGAFIPAVMVASLYFFDHTVASKMAQQKEYNLQKPSSYHYDLFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQMIRKKVVKSAKDCIKQQGSTNELYGKMQAVLVEMNSEPNSKELKNLKEAVMKSTENNGEKITFDPEKHIDAYIPVRVNEQRLSNLLQSILVGLSIFSISVIKMIPTSVLWGYFAYMAIDSLPGNQFWERILFLFISPSRRNKMLEGPHASFVESVPFKTIAIFTIFQCVYFLVCYGVQLIPVGGILFPLPFFLLIPIREHLLPYLFKPIDLQELDAAEYEEILGVPKSMHINDDDSNAEDYYDAELLDEMTTHRGELKLRTVSQINRNFTEGMHQTDIYF* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00592 650 Gene3D Helical hairpin bin 14 56 - -
Lapu8g00592 650 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Lapu8g00592 650 Pfam HCO3- transporter family 193 370 IPR011531 GO:0006820|GO:0016020
Lapu8g00592 650 Pfam HCO3- transporter family 445 535 IPR011531 GO:0006820|GO:0016020
Lapu8g00592 650 PANTHER ANION EXCHANGE PROTEIN 2 592 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00592 Lapu-Chr8 23474116 23478454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00592 3 633 Antiporters AT5G25430 64.969 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00592 K24194 - gmx:100808880 1007.67