Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00531 ATGGCTGTGGAACTCATGGGGTTCCCCAAAATCGATGATCAAAAGGCTATCCAAGAGGCTGCATCGGAAGGCCTCAAGGGCATGGAACACCTGATCCGAATCCTCTCCCACCAACCCTCTCACTTGAACACCGACCTCACCGACGTTACCGTCTCCAAGTTCAAGAAACTCATCTCCCTCCTCAACCGAACCGGCCACGCCCGCTTCAGACGAGCTCCGGTTCAGCCACCCGAACCGGTTCAAAACCCCGCGACTGTTCAACCCCCGGCACCGGTTCACACTCCTCCCTCTGCACCGGTCCATCTTCCTCCCCCGCAAAACGCGAACGTCTCTCTTCCGGCGATCTTCGCGTCGCCGGCGCCGGTTCACCATGCGCCGGCGAGCGTGACGCTCGACTTCACGAAGCCGCACAACGCGCTCCGGAACTCCAAGGCGAAGTCCGTGGAGCTCGAGTTCTCGAAGGAGACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTTCTCGCCCCGCCCCCGCCCCCGCCCGCGACCTCCGCCGGAAAACCGCCGGCCTTCAAGAAACGCTGCCTCGAACACCGCGAACACTCCGATGACGTCTCCGGATCCGGCAAGTGCCACTGCGTCAAGCGAAGGAAAAATAGGGTGAAGAAGACGGTGAGAGTGCCGGCGATTAGTTCGAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGTTCACCGTACCCTCGAGGGTATTACAAGTGCAGCACGGTGAGAGGGTGTCCCGCGAGGAAACACGTGGAGCGCGCACCAGACGATCCGGCGATGCTGATAGTGACGTACGAGGGGGAACACAGGCACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGAGTGGTGGGTTTGGTGTTCGAGTCAACGTAG 981 0.6086 MAVELMGFPKIDDQKAIQEAASEGLKGMEHLIRILSHQPSHLNTDLTDVTVSKFKKLISLLNRTGHARFRRAPVQPPEPVQNPATVQPPAPVHTPPSAPVHLPPPQNANVSLPAIFASPAPVHHAPASVTLDFTKPHNALRNSKAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKIFLAPPPPPPATSAGKPPAFKKRCLEHREHSDDVSGSGKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00531 326 MobiDBLite consensus disorder prediction 69 106 - -
Lapu8g00531 326 ProSiteProfiles WRKY domain profile. 242 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00531 326 SUPERFAMILY WRKY DNA-binding domain 245 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g00531 326 MobiDBLite consensus disorder prediction 76 103 - -
Lapu8g00531 326 Pfam WRKY DNA -binding domain 249 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00531 326 SMART WRKY_cls 247 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00531 326 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 312 IPR044810 GO:0003700
Lapu8g00531 326 Gene3D WRKY domain 234 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g00531 326 Pfam Plant zinc cluster domain 201 245 IPR018872 -
Lapu8g00531 326 FunFam WRKY transcription factor 65 231 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00531 Lapu-Chr8 22486122 22489222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00531 1 325 WRKY Transcription Factor Family AT2G24570 60.756 9.60e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu8g00531 WRKY 8.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00531 - - pvu:PHAVU_001G060200g 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00531 8 22486122 22489222 Lapu8g00531 8 22486122 22489222 ECH