Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00525 ATGGTAGATCAGACCAACCAGAACTACGTGTGGCCTGAAAGAAGGTCTTTTGAGGCACCACCCCGTGTATCACACGATTCAGACTCATTTAGGTCACCGTTCACTAGGAGAGGTGTGAATGCAGACAAGTACGGGGAAATTTCAGTGCCAGAGACTGACATAAGTTTTGTAAGCTCTAGAAGGTCAAGTACAGATCGCTTATTCCCATCATTGTATAATAACAACAACAACCACTCAGAGACGGGAATGTCCAACCCTCGACTATCATATAGCTCTGACACAGATGCAAATAATTATAGCTTTGAGTCGATGCCTTTTGGAAGGAGGTCTATGGATATTGGCTCGGATTTCTCATCCTTCTCACAAGAGAGTGAGAGTATGCCATCATCTACATCACAGGGCATGGATGATGTGGAGGTTGAAATGAGAAGATTGAAATTGGAGCTCAAGCAAACAATGGAAATGTATAGCAATGCCTGCAAAGAAGCACTCACAGCACAACAAAAGACTGTGGAACTCCAACGCTGGAAATTAGAGGAAGAGAGGAGATTGGACGAGGCAAGGCTTGCTGAAGAAGCTGCATTGGCGATTGCTGAAAAGGAGAAGGAAAGATCAAAGGTAGCTATGGAGACAGCTGAGGCACAAAAGAGGATTGCGGAACTAGAATCACAGAAGAGAATAAATGCAGAAATGAAAGCATTTAAAGAAACAGAAGAGAAAAGAAAAGTAGTGGATGCTTTATCAAACAATGGTTTGAGGTATAGAAGGTACATAATCGAGGAGATTGAAGCTGCCACCAATTTTTTTACTGAGTCGCAAAAGATTGGAGAAGGGGGCTATGGTCCAGTTTATAAGTGCCTTTTAGACCATACACCTGTGGCAGTGAAAGTTCTACGTCCGGACGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTACTGAGTTGCATTCGGCATCCAAACATGGTTCTCCTCCTGGGAGCCTGCCCGGAGTATGGCTGCCTTGTATATGAGTACATGGCAAATGGAAGCTTAGATGACTGTCTGTTTTGTCGAGGAAACACGCCCCCAATTTCATGGCAGCTCAGGTTCAAAATTGCAGCTGAAATTGGCACAGGTTTGTTATTCCTCCACCAGACCAAACCTGAGCCTCTTGTGCATAGAGACCTTAAACCAGCCAACATCTTGCTGGACAGAAACTATGTGGCAAAGATCAGTGATGTAGGATTAGCCAGGCTGGTTCCACCTTCAGTGGCAGATAATGTGACACAGTATAGGATGACATCTGCTGCTGGAACATTCTGTTACATAGACCCTGAGTACCAACAGACAGGAATGTTAGGAGTGAAATCTGACATATACTCTCTTGGGGTCATTTTCCTACAAATTTTGACAGCAAGACCTCCAATGGGTTTGGCTCATCATGTTGAAAGAGCCATTGAGAAAGGAACATTTGTTGAAATGTTGGATCCAAAAGTACCTGACTGGCCAATAGAGGATGCCTTAAACTTAGCAAAGATTGCTATCAGGTGTGCTGAACTAAGGAGGAAAGACAGACCTGATCTTGGCAAGGAAGTGTTGCCTGAATTAGAAAGGTTAAGAGATCTTGCTGAGAACAATGATCAGTATTCAATGTGGGGTGGCTATGTTAGCCCATCCAATCAAAGCCAAGTTTCTCTTCAACTGGATGGAGTCAGTTCTCCATTTCCTTATTCTGGGGAGAGCTCAAGAAATGCATCAAGTCCTGTTTGA 1758 0.4397 MVDQTNQNYVWPERRSFEAPPRVSHDSDSFRSPFTRRGVNADKYGEISVPETDISFVSSRRSSTDRLFPSLYNNNNNHSETGMSNPRLSYSSDTDANNYSFESMPFGRRSMDIGSDFSSFSQESESMPSSTSQGMDDVEVEMRRLKLELKQTMEMYSNACKEALTAQQKTVELQRWKLEEERRLDEARLAEEAALAIAEKEKERSKVAMETAEAQKRIAELESQKRINAEMKAFKETEEKRKVVDALSNNGLRYRRYIIEEIEAATNFFTESQKIGEGGYGPVYKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFCRGNTPPISWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGVIFLQILTARPPMGLAHHVERAIEKGTFVEMLDPKVPDWPIEDALNLAKIAIRCAELRRKDRPDLGKEVLPELERLRDLAENNDQYSMWGGYVSPSNQSQVSLQLDGVSSPFPYSGESSRNASSPV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00525 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Lapu8g00525 585 SMART serkin_6 269 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00525 585 CDD STKc_IRAK 275 535 - -
Lapu8g00525 585 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 241 341 - -
Lapu8g00525 585 FunFam U-box domain-containing protein 51 342 542 - -
Lapu8g00525 585 SUPERFAMILY Protein kinase-like (PK-like) 253 524 IPR011009 -
Lapu8g00525 585 MobiDBLite consensus disorder prediction 18 32 - -
Lapu8g00525 585 MobiDBLite consensus disorder prediction 1 36 - -
Lapu8g00525 585 ProSiteProfiles Protein kinase domain profile. 269 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00525 585 Coils Coil 135 181 - -
Lapu8g00525 585 Gene3D Phosphorylase Kinase; domain 1 249 341 - -
Lapu8g00525 585 Coils Coil 195 224 - -
Lapu8g00525 585 PANTHER OS02G0152300 PROTEIN 43 553 - -
Lapu8g00525 585 Pfam Protein kinase domain 269 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00525 585 MobiDBLite consensus disorder prediction 563 585 - -
Lapu8g00525 585 Gene3D Transferase(Phosphotransferase) domain 1 342 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00525 Lapu-Chr8 22385889 22391805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00525 21 562 Receptor kinase-like Gene Family AT1G78940 61.871 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lapu8g00525 Pkinase 6.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00525 - - gmx:100787522 933.324