Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00522 ATGCAAAAAGACAAGGAAATTGTTAGCAAAGAGGGTGAAGAGATTGAAATGGAAGGTGGGAGTGATCATGAGAAGAAGAAGGAGGAAACCCTACCACCAGGATTTCGTTTTCACCCCACCGATGAAGAACTCATTTCTTACTACCTCTCAAACAAGATTTCAGATTCTAATTTTACAGGAAAAGCAATAGCTGATGTAGATCTCAACAAATGTGAACCATGGGAGCTTCCCGGGAAGGCGAAGATGGGGCAAAAAGAATGGTACTTCTTCAACTTAAGAGATCGTAAATATCCGACAGGTGTGAGAACCAATAGAGCAACGAACACAGGGTACTGGAAAACAACTGGGAAGGACAAGGAGATCTTCGACAGTACTACATCGGAATTGGTTGGTATGAAGAAGACTTTGGTTTTCTACAAAGGTAGGGCTCCCAGAGGAGAGAAAACCAACTGGGTCATGCATGAATATCGCATTCATTCAAAATCCACCTTCAAAATCAATAAGCAAGATGAATGGGTGGTTTGCCGGGTATTCCGCAAGAGTGCTGGTGCAAAAAAGTTTCCCTCTAATGCCAACCACACCAGAACAGTGAATCCTTATAGTCTGGAAGTTGGCCCTAGCATCGTGCCACCACCAATGATGCACCTGGGAGATCCTTCTGCTCATTTAAATTTCCTTTATGGATCAAGAAACTACATGATGAGCCCTTCGGAGGTAGAGGTAGCTGAAGTGACAAGGGTCTTGAGAGGTGGTGGATCAACAAGTGTGAATGTGATGAACCTGCCAATAATGCACCCCCATTTGAACAATCCTGCAGTAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGGTTCACCATTTCTGGCCTTAATTTGAACCTGGGAGGAGGAACAGTTTCTTCTACTGCCACCACTCAAACACAACCCCTTTTGAGGCCAATGATGCCACCACAACCACAGCCACTTTCTGCTCACACAGTGGCCCAAGTGAATCATGATTTCAGTTCCAACATGGTGACACCCAGTGCTCTTGCTGCTGACAATGTAGGGTATGGTGCAGACATGACCAATGCAAATTCTCATGGCAATAGGTACATGGGCATGGACCACTGCATGGATCTAGACAATTACTGGCCTTCCTACTAA 1143 0.4549 MQKDKEIVSKEGEEIEMEGGSDHEKKKEETLPPGFRFHPTDEELISYYLSNKISDSNFTGKAIADVDLNKCEPWELPGKAKMGQKEWYFFNLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFDSTTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSTFKINKQDEWVVCRVFRKSAGAKKFPSNANHTRTVNPYSLEVGPSIVPPPMMHLGDPSAHLNFLYGSRNYMMSPSEVEVAEVTRVLRGGGSTSVNVMNLPIMHPHLNNPAVAAAAAGGGGGFTISGLNLNLGGGTVSSTATTQTQPLLRPMMPPQPQPLSAHTVAQVNHDFSSNMVTPSALAADNVGYGADMTNANSHGNRYMGMDHCMDLDNYWPSY* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00522 380 ProSiteProfiles NAC domain profile. 31 180 IPR003441 GO:0003677|GO:0006355
Lapu8g00522 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 28 264 - -
Lapu8g00522 380 SUPERFAMILY NAC domain 28 180 IPR036093 GO:0003677|GO:0006355
Lapu8g00522 380 FunFam NAC domain-containing protein 100-like 40 184 - -
Lapu8g00522 380 Gene3D NAC domain 40 184 IPR036093 GO:0003677|GO:0006355
Lapu8g00522 380 MobiDBLite consensus disorder prediction 1 35 - -
Lapu8g00522 380 Pfam No apical meristem (NAM) protein 32 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00522 Lapu-Chr8 22327597 22330906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00522 17 380 NAC Transcription Factor Family AT2G24430 50.388 1.89e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu8g00522 NAM 1.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00522 - - gmx:100811175 592.038