Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00511 ATGGCCGCGCCACCACAACTTCACTTTCCGCCAGGATTCAGATTCCACCCCACAGACGAAGAACTCGTCGTCCATTACCTCTGCCGCAAATGTGTCAACCAACAAATCGACGTTCCCATAATCGCCGAAATCGACCTCTACAAATACGAACCTTGGGACCTTCCAGGAATGGCGTTGTACGGAGAGAAAGAGTGGTATTTTTTCTCGCCGAGAGACCGGAAGTACCCCAACGGTTCGCGGCCGAACCGGTCGGCGGGAACCGGATACTGGAAAGCAACCGGAGCAGACAAACCGATTGGTAAACCGAAACCGGTTGGGATCAAGAAAGCGTTGGTGTTTTACGCCGGAAAAGCGCCCAAGGGAGAGAAAACAAACTGGATCATGCACGAGTATCGCCTCGCCGAGGTGGATCGTTCCGCCCGCAGAAAAAATAGCTTGAGGCTCGATGACTGGGTGCTGTGTCGCATATACAACAAGAAAGGCGCAGTTGAGAAGCAACCACCGCTCAGAATTGAGTGTTCCGAAACGGAGGACGACAAGCCGGTGATTGCACCGCCGTTCGCGGAGGCGACAGTGGCGGAGTGCATGTACTTCGAGGCGTCGGACTCGGTGCCGCGACAGCTGACGACGGACTCGAGCTGCTCGGAGCAGGTGGTGTCGCCGGAGGTGGCGAGCGAGGTGCAGAGCGAGCCCAAGAGGAGCAACAACGTGTTTGCGTACAATTACGTGGATCCCACGCTGGCGTCGCAGTTCCATAGCTCGAATCAGATGTCGCCGCTGCAGGATATATTCATGTACCTCCCCACGCCATTCTGA 816 0.56 MAAPPQLHFPPGFRFHPTDEELVVHYLCRKCVNQQIDVPIIAEIDLYKYEPWDLPGMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPIGKPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLAEVDRSARRKNSLRLDDWVLCRIYNKKGAVEKQPPLRIECSETEDDKPVIAPPFAEATVAECMYFEASDSVPRQLTTDSSCSEQVVSPEVASEVQSEPKRSNNVFAYNYVDPTLASQFHSSNQMSPLQDIFMYLPTPF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00511 271 FunFam NAC transcription factor 18 163 - -
Lapu8g00511 271 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lapu8g00511 271 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Lapu8g00511 271 PANTHER NAC TRANSCRIPTION FACTOR 56 9 211 - -
Lapu8g00511 271 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Lapu8g00511 271 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00511 Lapu-Chr8 22107337 22109269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00511 7 271 NAC Transcription Factor Family AT1G01720 70.280 5.15e-140 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu8g00511 NAM 2.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00511 - - pvu:PHAVU_001G072200g 489.189