Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00510 ATGTCAAAGTCTCCCTCTCATGAACAGCGACAGTCCATTTATTCTGCCTCTCTGCCTGGGGAATTTAATGAGGCAATGGGAATGGATGATCCAGAATCTACAATGGCAACTGTTGCTAATTTTGTGGAGCAACTGCATGCCAACTTGTCATCACCAGTTGAGAAAGAAACTATTACAGCACGCTTACTAGGTATTGCCAGGAGACGAAAGGATGCTAGAACACTCATTGGTTCTCATGCCCAAGCCATGCCATTGTTCATAAACATTCTCAGAAATGGAACCCCTCTTGCAAAAGTTAATGTTGCTTCCACTCTAAGTGTCCTGTGCAAAGATGAAGACCTGAGGTTAAAAGTACTACTTGGTGGTTGTATCCCACCATTATTATCACTTTTAAATTATGAATCCACGGACACCAGGAAGGCAGCAGCTGAAGCAATATATGAAGTTTCCTCTGGTGGTCTTTCTGATGATCATGTTGGTATGAAAATTTTTGTCACAGAGGGTGTAGTTCCAACATTATGGAGTCAACTAAATCCAAAGAACAAGGAAGATAAAATTGTGGAGGGTTTTATTACTGGAGCATTAAGAAATCTTTGTGGTGACAAAGACGGCTACTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATCATAGTAGGGCTCTTGTCTTCAGATAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTGGCACGATTAATGCTGGCATTCAGTGATAGTATCCCCAAAGTAATAGACTCTGGAGCAGTCAAAGCTTTACTTCAGCTTGTTGGTCCAGAAAATGACATTTCGGTAAGAGCTAGTGCTGCTGATGCCCTAGAGGCCCTCTCTTCAAAATCTACCAAGGCTAAAAAGGTCATTGTTAATGCAGATGGAATTCCAATCCTTATTGGAGCAATAGTTGCTCCTTCCAATGAGTGTATGCAAGGTGATGGTGGCCAGGCTCTACAAGGGCACGCAACACAAGCTTTAGCCAATATTTGCGGAGGCATGTCTGCTTTAATACTATATCTTGGAGAACTTTCACATTCTCCTCGTCTTGATGCACCAGTTGGGGATGTAATTGGGGCTCTTGCTTATACACTCATGGTCTTTGAGGAAAACACTGGTGTTGATGAGAAACATTTTGATGCAACTCAGATAGAGGATATTCTAGTAACTCTTTTAAAGCCTCGAGACAGCAAACTGATTCAAGAGCGAGTCCTTGAGGCTATGGCTAGCCTTTACGGAAACATCTGTCTTTCAAAGTGGCTCATTCAGGCAGATTCAAAGAAGGTTCTTATTGGTCTTATAACCATGGCTTCCACTGATGTGCAAGAGTATCTGATACTTTCATTAACAACCTTGTGTAGTGATAAGATAGGAGTATGGGAGGCCATAAAAAAGAGAGAAGGTATCCAATTACTAATATCATTGCTTGGATTATCCAGTGAGCAGCATCAAGAGTACTCAGTTCAGCTGCTAGCAATCTTAACTGACCAGGTCGATGACAGTAAGTGGGCAATCACTGCTGCTGGAGGAATTCCTCCACTGGTGCAGTTGTTGGAGACAGGATCACAGAAAGCAAGAGAGGAAGCAGCAAATGTTCTATGGAGTTTGTGCTGTCACAGTGAAGATATTCGCGCTTGTGTTGAAAGTGCTGGAGCCATCCCGGCATTTTTGTGGCTTCTTAAGAGTGGTGGACCAAAAGGGCAGGAAGCATCTGCTATGGCACTCACAAAGCTTGTTCGAATAGCTGATTCTGCCACAATTAATCAGCTATTAGCATTGCTCCTGGGTGATTCTCCAAGCTCAAAAGCCCACATAATCCGAGTTTTAGGCCATGTTCTTACTATGGCTTCGCAGAATGATCTCCTTGAAAAGGGTTCTGCTGCTAACAAGGGCTTGAGATCTCTAGTTCAGGTCCTCAATTCGTCGAATGTGGAAACTCAAGAATATGCAGCTTCTGTTCTAGCTGATTTGTTTATCACAAGACAAGACATCTGTGATAGTCTTGCAACTGATGAGATTGTGCTTCCTTGCATGAAGCTTTTGACTAGCAAAACTCAAGTTGTTGCCACTCAATCAGCTCGAGCATTAAGTGCTCTGTCTCGTCCAACAAAGAACAAGGCTGCAAATAAAATGTCCTATATTGTAGAGGGTGATGTTGAGCCATTAATCAAGTTAGCTAAAACATCCTCTGTTGATGCTGCTGAAACTGCTGTTGCTGCATTGGCCAATCTTCTCTTTGATCCTTTTATTGCTGCTGAGGCTCTAGCTGAAGATGTTGTTTCAGCTTTAACTAGAGTTCTGGCAGAAGGGACCTTGGAAGGTAAACAAAATGCATCTCGTGCACTTCATCAATTATTGAAGCATTTTCCTGTAGGTGACGTTCTCAAGGGGAGTGCTCAATGTCGTTTCACTGTGCTTGCACTTGTTGATTCCTTAAGAGCTATGGATATGGATGGAACTGATGCTGCAGATGCTTTAGAAGTAATTTCACTGCTAGTGAGGACAAAACAGGGTGTCAGCAACAATTACACTGCATGGTCTGCTCTGGCTGAAATACCATCAAGCCTAGAACTTCTTGTCTGCTGCCTGGCTGAGGGGCCTTCCCTTGTGCAAGACAAGGCAATTAAAATTCTATCTAGACTTTGTGGGGATCAGCCAGTTGTTCTTGGTGGTTTGTTATCTACTAGTTCCAGATCCATTGGTTCATTGGCTAATAGAATAATGAACTCCTCCAGTCTAGAAGTAAAAATTGGAGGGGCTGCCTTGCTAATTTGTGCAGCAAGGGAGAAGAAAGAGCTTTCATTGGATTCACTTGATGTTTCTGGGTGTCTGAAACCATTAATATATTCTTTAGTTGAAATGATAAAGCAGAGTTTTAGGTATTCGTCATTAGAAATTGATGTTCTCACTTCTAAAGGTTTTATGGAGAGAAATGCTTTTCAAGAAGCAGATGAGTTTGATATTCCCGATCCTGCCACTTCCTTGGGAAGCACTATTGCCATGTGGTTACTTTCAGTTATTGCTTCCTTCCATACAAAGAGCAAGGTCACAATTATGGAAGCTGGTGGACTTGAAGCCCTCTCTGACAAACTTGGAAGATATACTTCAAATCCACAGGCAGAATATGAGGATACAGAAGGAATATGGATCAATGCCTTGCTCTTGGCCATTTTATTTCAGGATGCTAATGTTGTTCTATCTCCTGTGACAATGCGCATTATACCTTCTCTCACTCTTCTGCTAAGATCTGATGAAGTAATTGATAAATATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGCAATAAGGGAATAGATCTTGCCATTGCAAATTCTGGTGCTGTTGCTGGATTAATAACTATTATTGGGCATGTAGAGTCAGATATGCCTAATCTCATGGATTTATCAGAAGAATTTTCTTTGGTACAAAACCCTGAACAAGTTGTTTTAGATCACCTTTTTGAAATTGAAGATGTAAAAGTGGGTTCTACTGCCAGGAAATCTATACCGCTCTTAGTGGATCTCCTGAGACCAATACCAGAAAGGCCTACTGCTCCACCAGTTGCTGTTAGACTCTTGATATCCATTGCAGATGGAAGTGATAGCAATAAATTAATCCTAGCTGAAGCTGGAGCTATCGAAGCTTTGAACAAATACCTGTCCTTGAGTCCTCAAGACTCAACTGAGGCTGCTATATCTGAGTTATTGAGAATATTATTTTGCAATTCTGATCTCATTAAACACGAAGCATCAATTAATTCATTGAACCAACTCATAGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATACAGTGCAGCGAGAGCACTTCATGAACTTTTTGATGCCGACAACTTTAGAGACTCAGAATTAGCTAAACAAGCCATTCAGCCATTGGTTGACATGCTTAACACAACATCAGGGCACGAGCAGGAAGCTGCTCTCATGTCCTTGATCAAGTTAACTTCAGGAAATTCTTCAAAAGTATCTCTTCTTACTGATATGGAAGGAAACCCACTTAAATGTTTATATAAAATACTGTCTTCTGCTTCATCCTTGGAACTGAAGAGTCATGCTGCCCAACTCTGCTTTGCTCTTTTTTCCAATAGCAAGATCAGAGCAGATCCAGTTGCCTCAGAATGCCTAGAACCCCTTATATTACTGTTGCAGTCTGGTTCTGAGACAGCAATAGAGTCTGGGGTTTGTGCTTTTGAGAGATTGTTGGAAGATGAACAACAGGTAGAGCTTGCAGCAGCCTACAATGTTGTGGATCTCCTTGTGAGCTTGGTTTCTGGTACTAACTATCAGCTTATCGAGTCTACCATATCTGCTCTAATCAAATTGGGCAAAGATAGGACTCCAAGTAAAATGGACATGGTGAAAGCTGGCATTATTGATAATTGTCTCAAGCTACTACAATTAGCACCTAGCTCTTTATGCTCCACAATATCTGAGCTCTTTCGCATTTTAACTAATAGTAGTGCAATTGCAAGAAGTTCAGATGCTGCAGAAATTGTAGAACCTCTTTTCCATGTTTTGCTCCGTCGAGATTTCAACTTATGGGGACAGCATAGTGCGTTACAAGCACTTGTAAATATATTGGAGAAACCACAAAGTCTTGCCACCTTGAAGCTTACTCCAAGCCAAGTTATTGAACCCTTGATTTCTTTTCTGGAATCCCCATCCCAAGCTATTCAGCAGCTTGGGACAGAACTGTTATCTCATCTTCTTGCACAGGAACATTTTCAGCAAGATATTACGACTAAGAATGCAGTTGTGCCCCTTGTACAGCTTGCAGGAATTGGAATATTGAACTTACAGCAAACAGCTATAAAAGCATTGGAAAAAATTTCCACTAGTTGGCCAAAGGCTGTTGCTGATGCAGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGAAGACCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAACGTATTACATTCCAATGCCGATTACTATTTTAAAGTTCCTGTGGTAGTTCTTGTAAAACTTTTGCACTCAACACTTGAGAGTACAATTAGCATAGCCCTTAATGCTTTAATAGTTCACGACAGAAGTGATGCTTCAAGTGCTGAGCAGATGATGGAAGCTGGAATTATAGAGGGTCTGTTAGACCTTTTAAGATCTCATCATTGTGAAGAAGCATCTGGTAGGTTACTAGAAGCTTTATTTAACAATGTGAGAGTACGAGAGATGAAGGTGTCTAAGTATGCTATAGCACCTTTGTCCCAGTATCTCTTGGATCCACAAACCAGATCACAGTCTGGTAAGCTTCTTGCTGCTTTAGCTCTGGGAGATCTTTCCCAGCATGAAGGACATGCTAGATCTAGTGCCTCTGTTTCTGCATGCCGTGCATTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGAAGGTGGTAGCAATTTGTGCATTGCAAAACTTTGTCATGAACAGCAGGACAAATAGACGTGCTGTTGCAGAAGCTGGGGGCATCCTGGTGATTCAAGAATTGCTGCTGTCTCCAAACACAGAAGTTGCTGCACAAGCTGCTTTATTGATCAAATTTTTGTTTTCTACACATACACTGCAAGAATATGTATCAAATGAGTTGATCAGGTCTTTGACAGCTTCACTGGAAAGGGAGTTATGGTCAACTGCCACAATCAATGAAGCGGTTTTGAAAACTTTGCATGTGATATTCATGAACTTCCCTAAGCTCCATACATCTGAAGCAGCAACTCTTTGCATTCCTCATTTGGTAGGGGCACTTAAATCTGGTGGTGAAGCAGCTCAGGACTCTGTACTTGACACATTTTTCTTGCTAAGACAATCTTGGTCAACTATGCCAATAGACATAGCAAAGTCCCAAGCTATGATAGCTGCTGAAGCCATCCCCATTTTGCAAATGCTCATGAAAACCTGCCCACCTAGTTTCCATGAGAGGGCAGATACTCTACTGCATTGCTTACCAGGGTGTTTGACTGTCACCATTAAGCGTGGAAACAACCTCAGGCAAACTATGGGAAGCACTAATGCATTCTGCCGGTTAACAATAGGAAATGGTCCTCCAAAACAAACCAAGGTGATGAATCATAGTACTTCTCCCGAATGGAAAGAAGGATTCACTTGGGCATTCGATGTACCTCCAAAGGGCCAAAAGCTACATATCATATGCAAAAGCAAGAATACTTTTGGGAAGACAACTCTTGGAAGAGTCACCATCCAAATTGATAAAGTTGTATCAGAGGGGGTTTATAGTGGGTTATTCAGTCTTAATCATGATGGTAACAAAGATGGTTCTTCCCGAACACTTGAAATTGAGATTATATGGTCCAACAGGATCTCCAATGATGACATTTGA 6408 0.4156 MSKSPSHEQRQSIYSASLPGEFNEAMGMDDPESTMATVANFVEQLHANLSSPVEKETITARLLGIARRRKDARTLIGSHAQAMPLFINILRNGTPLAKVNVASTLSVLCKDEDLRLKVLLGGCIPPLLSLLNYESTDTRKAAAEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWSQLNPKNKEDKIVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLQLVGPENDISVRASAADALEALSSKSTKAKKVIVNADGIPILIGAIVAPSNECMQGDGGQALQGHATQALANICGGMSALILYLGELSHSPRLDAPVGDVIGALAYTLMVFEENTGVDEKHFDATQIEDILVTLLKPRDSKLIQERVLEAMASLYGNICLSKWLIQADSKKVLIGLITMASTDVQEYLILSLTTLCSDKIGVWEAIKKREGIQLLISLLGLSSEQHQEYSVQLLAILTDQVDDSKWAITAAGGIPPLVQLLETGSQKAREEAANVLWSLCCHSEDIRACVESAGAIPAFLWLLKSGGPKGQEASAMALTKLVRIADSATINQLLALLLGDSPSSKAHIIRVLGHVLTMASQNDLLEKGSAANKGLRSLVQVLNSSNVETQEYAASVLADLFITRQDICDSLATDEIVLPCMKLLTSKTQVVATQSARALSALSRPTKNKAANKMSYIVEGDVEPLIKLAKTSSVDAAETAVAALANLLFDPFIAAEALAEDVVSALTRVLAEGTLEGKQNASRALHQLLKHFPVGDVLKGSAQCRFTVLALVDSLRAMDMDGTDAADALEVISLLVRTKQGVSNNYTAWSALAEIPSSLELLVCCLAEGPSLVQDKAIKILSRLCGDQPVVLGGLLSTSSRSIGSLANRIMNSSSLEVKIGGAALLICAAREKKELSLDSLDVSGCLKPLIYSLVEMIKQSFRYSSLEIDVLTSKGFMERNAFQEADEFDIPDPATSLGSTIAMWLLSVIASFHTKSKVTIMEAGGLEALSDKLGRYTSNPQAEYEDTEGIWINALLLAILFQDANVVLSPVTMRIIPSLTLLLRSDEVIDKYFAAQAMASLVCNGNKGIDLAIANSGAVAGLITIIGHVESDMPNLMDLSEEFSLVQNPEQVVLDHLFEIEDVKVGSTARKSIPLLVDLLRPIPERPTAPPVAVRLLISIADGSDSNKLILAEAGAIEALNKYLSLSPQDSTEAAISELLRILFCNSDLIKHEASINSLNQLIAVLRLGSRNARYSAARALHELFDADNFRDSELAKQAIQPLVDMLNTTSGHEQEAALMSLIKLTSGNSSKVSLLTDMEGNPLKCLYKILSSASSLELKSHAAQLCFALFSNSKIRADPVASECLEPLILLLQSGSETAIESGVCAFERLLEDEQQVELAAAYNVVDLLVSLVSGTNYQLIESTISALIKLGKDRTPSKMDMVKAGIIDNCLKLLQLAPSSLCSTISELFRILTNSSAIARSSDAAEIVEPLFHVLLRRDFNLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAIKALEKISTSWPKAVADAGGIFELAKVIIQEDPQPPHALWESAALVLSNVLHSNADYYFKVPVVVLVKLLHSTLESTISIALNALIVHDRSDASSAEQMMEAGIIEGLLDLLRSHHCEEASGRLLEALFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQSGKLLAALALGDLSQHEGHARSSASVSACRALISLLEDQPTEEMKVVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNTEVAAQAALLIKFLFSTHTLQEYVSNELIRSLTASLERELWSTATINEAVLKTLHVIFMNFPKLHTSEAATLCIPHLVGALKSGGEAAQDSVLDTFFLLRQSWSTMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHERADTLLHCLPGCLTVTIKRGNNLRQTMGSTNAFCRLTIGNGPPKQTKVMNHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKTTLGRVTIQIDKVVSEGVYSGLFSLNHDGNKDGSSRTLEIEIIWSNRISNDDI* 2136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00510 2135 Gene3D - 627 822 IPR011989 -
Lapu8g00510 2135 Gene3D - 858 1144 IPR011989 -
Lapu8g00510 2135 Pfam C2 domain 2008 2107 IPR000008 -
Lapu8g00510 2135 Gene3D - 1346 1604 IPR011989 -
Lapu8g00510 2135 Gene3D - 364 626 IPR011989 -
Lapu8g00510 2135 SMART C2_3c 2008 2104 IPR000008 -
Lapu8g00510 2135 SUPERFAMILY ARM repeat 81 796 IPR016024 -
Lapu8g00510 2135 CDD C2 2009 2099 - -
Lapu8g00510 2135 SMART arm_5 1708 1749 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 665 705 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 1834 1874 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 459 500 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 156 200 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 1375 1415 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 244 285 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 287 336 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 1206 1246 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 111 151 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 623 663 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 710 750 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 544 584 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 502 542 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 1543 1584 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 1416 1456 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 1458 1498 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 751 791 IPR000225 GO:0005515
Lapu8g00510 2135 SMART arm_5 201 242 IPR000225 GO:0005515
Lapu8g00510 2135 SUPERFAMILY ARM repeat 194 458 IPR016024 -
Lapu8g00510 2135 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 10 2129 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lapu8g00510 2135 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Lapu8g00510 2135 Gene3D - 25 153 IPR011989 -
Lapu8g00510 2135 Gene3D - 1610 2007 IPR011989 -
Lapu8g00510 2135 Gene3D - 1163 1345 IPR011989 -
Lapu8g00510 2135 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2006 2112 IPR035892 -
Lapu8g00510 2135 ProSiteProfiles C2 domain profile. 1988 2105 IPR000008 -
Lapu8g00510 2135 Gene3D - 154 354 IPR011989 -
Lapu8g00510 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Lapu8g00510 2135 SUPERFAMILY ARM repeat 859 1288 IPR016024 -
Lapu8g00510 2135 Gene3D C2 domain 2008 2133 IPR035892 -
Lapu8g00510 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Lapu8g00510 2135 SUPERFAMILY ARM repeat 1612 2005 IPR016024 -
Lapu8g00510 2135 SUPERFAMILY ARM repeat 1188 1544 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00510 Lapu-Chr8 22083156 22094255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00510 432 714 U-box Gene Family AT2G23140 27.645 1.18e-11 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00510 - - gmx:100796864 3811.15