Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00501 ATGGACAAAGGGTGGCTTTCTAGTGAGGGTGTTGGTGTTTTTGGGGTGATGGGTTACATGGGTAGGTGTTGGTTAGTTGGGGTCATAATTGTGGTGGAGTGTGCCATCTTGCTGGCCACTGTTGGAGTAGAAGGGTATCCAGCTGAGGATTTGGTGGTGAGATTGCCTGGTCAACCTAATGTTGGGTTTAAGCAATTTGCAGGTTATGTTGATGTTGATGTCAAGCATGGAAGGAGCCTCTTCTACTATTTTGTAGAGGCTGAGAAAGACCCTGATAAGAAGCCCCTTACACTTTGGCTCAATGGAGGCCCTGGATGTTCTTCCATTGGAGGAGGGGCTTTTACTGAACTGGGACCCTTTTATCCCAATGGCGACGGACGTGGTCTACGAAGCAATTCGATGTCTTGGAATAAAGCATCCAACCTCATTTTTGTTGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCAGATTACAATTCTGGAGATGTCTCCACTGCCAATGATATGTATTTGTTCATGCTGAAATGGTACGAGAAGTTTCCATCATACAGAACAAGGGAGCTGTTCCTCACAGGAGAAAGCTATGCAGGACACTATATACCTCAATTAACTAATGTTCTCTTGGACCATAATGCTGGTTCAACTGGTTTCAAATTCAATATCAAAGGAGTTGCTATTGGAAACCCACTTTTGAGACTTGATCGGGATACACCTGCAACATATGAATACTTCTGGTCACATGGAATGATTTCTGATGAAATTGGTCTTGCCATTATGAATGATTGTGATTTTGATGATTATTCCTATGCAAGTCCTCACAACGTTTCTCATTCGTGCAACAATGCCATATATGAAGCAAATCTCATTGTTGGCGAGTACATAAACAACTATGATGTAATTCTAGATGTTTGTTATCCATCCATAGTGGAACAAGAATTGAGATTGAAAAGGATGGCAACAAAAATAAGTGTAGGTGTAGATGTGTGTATGAGTCTAGAAAGACGCTTTTACTTCAATCTCCCAGAGGTTCAGAAGGCTCTTCATGCAAACCGTACAAACCTTCCTTATGGCTGGTCCATGTGTAGTCATGTTCTAAACTATAGTGACACTGATGGTAACATCAACATCCTTCCAATTCTCAAAAGAATAGTCCAAAACCATATCCCAGTATGGGTTTTCAGTGGAGACCAAGATTCAGTGGTGCCATTATTGGGATCTCGAACACTCATTCGTGAACTAGCTCATGAATTGCAATTCAAGATTACAGTCCCATATGGGGCTTGGTTCCACAAAGGACAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTGTTGACTTTTGCCACTGTAAGGGGTGCTGCTCACATGGTACCTTATGCTCAACCTTCAAGAGCACTGCATCTATTCAGTTCATTTGTGCGTGGCAGAAGGTTGCCCAATACAACACGTCCTTCAATTGATGATTGA 1479 0.4233 MDKGWLSSEGVGVFGVMGYMGRCWLVGVIIVVECAILLATVGVEGYPAEDLVVRLPGQPNVGFKQFAGYVDVDVKHGRSLFYYFVEAEKDPDKKPLTLWLNGGPGCSSIGGGAFTELGPFYPNGDGRGLRSNSMSWNKASNLIFVESPAGVGWSYSNTTSDYNSGDVSTANDMYLFMLKWYEKFPSYRTRELFLTGESYAGHYIPQLTNVLLDHNAGSTGFKFNIKGVAIGNPLLRLDRDTPATYEYFWSHGMISDEIGLAIMNDCDFDDYSYASPHNVSHSCNNAIYEANLIVGEYINNYDVILDVCYPSIVEQELRLKRMATKISVGVDVCMSLERRFYFNLPEVQKALHANRTNLPYGWSMCSHVLNYSDTDGNINILPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNTTRPSIDD* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00501 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 466 IPR001563 GO:0004185|GO:0006508
Lapu8g00501 492 Gene3D - 380 479 - -
Lapu8g00501 492 FunFam Carboxypeptidase 380 479 - -
Lapu8g00501 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Lapu8g00501 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Lapu8g00501 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Lapu8g00501 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Lapu8g00501 492 FunFam Carboxypeptidase 46 310 - -
Lapu8g00501 492 Gene3D alpha/beta hydrolase 47 309 IPR029058 -
Lapu8g00501 492 Gene3D - 333 369 - -
Lapu8g00501 492 SUPERFAMILY alpha/beta-Hydrolases 44 486 IPR029058 -
Lapu8g00501 492 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Lapu8g00501 492 Pfam Serine carboxypeptidase 57 479 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00501 Lapu-Chr8 21933083 21937900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00501 339 482 Calmodulin-binding Proteins AT2G22960 25.694 1.17e-10 58.9