Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00499 ATGAAATGGTGGGGTACTCATGGAGACAATAATGTTCTTGTTATTGAACTTCTGGGACCCAGTCTTGAAGATCTCTTTTTCTTCTGTGGAAGTAAATTATCTCTCAAAACAGTTTTGATGTTGGCTGATCAGATGCTGACACGAATAGAATATTTGCACTCCAAAGGATTTTTGCACAGAGACATCAAACCAGATAACTTCCTTATGGGTTTTGGGAAGAAAGCAAATCAAGTTTACATGATTGATTTTGGACTAGCAAAAAGATATAGAGATCCAATCACAAATAAGCATATCCCTTATAGTGAGAACAAAGGCTTAACAGGTACTGCACGTTATGCAAGTTATCGTACTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTACGTTTTAATGTACTTTTTAAGAGGAAGTCTTCCATGGCAAGGTTTGCAAGCTGCCACCAAAAGGCAAAAGTATGATAAAATTTGCAAAATGAAGTTATCAACACCTATTGAGATACTTTGCAAGTCCTATCCTGTTGAGTTTGCTTCTTACTTTCATTATTGTCGCTCTTTGACATTTGATCAACGACCAGATTATGGTCTTCTGAAGCGTTTGTTTCGTAATTTATTCACTCATGCAGGTATAAAATTTTGA 654 0.3685 MKWWGTHGDNNVLVIELLGPSLEDLFFFCGSKLSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGFGKKANQVYMIDFGLAKRYRDPITNKHIPYSENKGLTGTARYASYRTHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATKRQKYDKICKMKLSTPIEILCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRLFRNLFTHAGIKF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00499 217 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00499 217 Gene3D Transferase(Phosphotransferase) domain 1 1 217 - -
Lapu8g00499 217 Pfam Protein kinase domain 10 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00499 217 SUPERFAMILY Protein kinase-like (PK-like) 3 214 IPR011009 -
Lapu8g00499 217 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00499 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 57 69 IPR008271 GO:0004672|GO:0006468
Lapu8g00499 217 PANTHER CASEIN KINASE-RELATED 3 211 - -
Lapu8g00499 217 FunFam CK1/CK1/CK1-D protein kinase 18 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00499 Lapu-Chr8 21886949 21892311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00499 11 150 MAP Kinase Kinase Kinase AT5G55090 31.429 9.21e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lapu8g00499 Pkinase 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00499 K08960 - gmx:100782913 414.075