Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00487 ATGTTTGCAGAGACAGGCCTTCTCTTCCCATATTTTCGAAATTTCTCTCAAGAGTTTCAACAGCTTGAGGAGTACTGCATGACCCAAAAGTCCAATGCTTCAATGAATGACCTCGTTGAATCTTCTTCTGCAATCTCAGAATATGATTTGTTAATAGAGGGAGATCTGTTCAAAGCACCAGAACCTATTATTGAAGAACCAGCTATAGACCTCGATCCTGTGCAAGCAGCCATCTCAATGATATCTTGTGGGGAGGATGTCGCCTCACAGGGTCTAAAATCATCAGATATTAATATACTTCAAAATGAACAGCTTCTGAGTGAGGTATTCTACGAGTGTAAAAAGGATCTCTTAGAAAAGACAGTGATAGGGTCACCACTCACTGATATTATGGAAATCAAGGTTCCAGCTCTGAACATTGAGGATAATTCAATTCAAGTTAACGAACCAGTTCCTCACGTGACTCTACCAAAAAGTATCAGTTCAGGAAGTCTGAGTTCAATGGACTGGATGCATGGAGCTGCAATGAAGCCCACTTTTCTGGATTTCCCAGGAATAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGCGAAGGAGATATAAAGACTCTTAGCACTGGCAACACGACTTTTGGCCAATCTCCCCCGGAGAGGCCTTTCCTTCTCGGCAACTGCACTAGTGAGGAACGTCAAGAAAAGCTCTCCAGATACAGAAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATTAAGTATGCTTGCAGGAAAGCACTTGCTGACAGTCAACCAAGAATCCGCGGAAGATTTGCAAAGACTGAAGAGTTAGATGTCAAGAGGCAATGA 849 0.4205 MFAETGLLFPYFRNFSQEFQQLEEYCMTQKSNASMNDLVESSSAISEYDLLIEGDLFKAPEPIIEEPAIDLDPVQAAISMISCGEDVASQGLKSSDINILQNEQLLSEVFYECKKDLLEKTVIGSPLTDIMEIKVPALNIEDNSIQVNEPVPHVTLPKSISSGSLSSMDWMHGAAMKPTFLDFPGIDFNAVYGMRRAFSEGDIKTLSTGNTTFGQSPPERPFLLGNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKRQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00487 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Lapu8g00487 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 163 275 IPR045281 GO:0009909
Lapu8g00487 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00487 Lapu-Chr8 21544694 21548648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00487 228 278 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 8.14e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu8g00487 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00487 - - aprc:113853022 467.618