Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00484 ATGGGGAGAAAAGGGAGCAGCTGGTTCTCGTCCGTGAAGAAAGTTTTCAAGTCATCTTCTAAAGACTTGCCAGAGCCTGAGAAGAAGAAGAAAGACAGCACACAGAAATTACAGCATGAAGTGGCAGAGTTGGTGTCTTTTGAGCATTTTCCAGTAGAGAGTTCTCCAGATAATAATGTGGCAAATGAAGAGAGTGGCACTTCAACTCCAGTTACAGAAGATAGAAGCCATGCCATAGCCGTTGCAGCAGCTACTGCTGCAGCGGCTGAAGCTGCCGTGGCGGCTGCTCAGGCAGCTGCAAGAGTGGTGAGATTGGCAGGTTATAGACGCCACTCCAAAGAAGAAAGAGCAGCTGTACTCATTCAATCATACTACAGAGGCTATCTAGCTCGACGTGCACTGCGAGCATTGAAGGGATTAGTGAGGCTGCAAGCACTGGTGAGGGGACACAATGTGCGAAAGCAAGCCCAAATGACGATGCGATGCATGCAAGCACTGGTGAGAGTGCAGGCCCGAGTAAGGGCCCGCCGACTCCAATTGAGTCACGTCGAAGAGGAAGCACAACAATATGAGAAGATCAAAGAGCCCAAGCCCAAGCCCATGCCCATGAGTCCCATGAGAAGGACACTCATTAATAATGACTGGGACAATAGGCGTCAAAGTAGCTACAAAATCGAGGAAAACGATTTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGAGCTCTCGCTTACGCTTTCAACTATCAACAGGAACAGCAACAGCAAAAACAATTTTTGGTGGCGGAATCGAAGGATAAGGATGATACAGGAACGAAGGAAAAAGGGCAATGGGGTTGGAACTGGTTGGACCGTTGGATGTCATCACAACCATACAATGCAAGGAACATGGGGCCTGCTGATACCTCTTACATGACTCTTGCATCCACAACATCAACTGCCACAGATAACATGTCTGAGAAGACAGTGGAAATGGATATGATTGCAACTCCAGGCCCAACCAATGCCAGAAGCATTAGCCCCATAAACCCAGACTTTATTGATTCAAGCCCACTCTCCAATAGGCACAATCATCACGTACCCCCCAGCCCAAATAGACGCTATATGGCCCCAACTCAGTCTGCAAAGGCCAAGGTTCGGGCTCAAGGTCCATCAAAGCCTCGGGTTTCAGGTGGGCCTCATTGGAACTCCTCAATCAAGGGAGGCTCTACATGCGACTCCTCTAGTTCAGGTGGAGGAATCACCGCTTATCAAATTCCAAGAAGTCCAGGCCCAAAAATCAATGGCATTCGTTCACAATCCAGAAGAATTGTGGGTAGCAGTCCAGATTACATTGAGGATTGGGCCCTTCCTCTTGGAGCCCATGGTTGGGCTTAA 1377 0.4873 MGRKGSSWFSSVKKVFKSSSKDLPEPEKKKKDSTQKLQHEVAELVSFEHFPVESSPDNNVANEESGTSTPVTEDRSHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYRRHSKEERAAVLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHVEEEAQQYEKIKEPKPKPMPMSPMRRTLINNDWDNRRQSSYKIEENDLRKHEAAMKRERALAYAFNYQQEQQQQKQFLVAESKDKDDTGTKEKGQWGWNWLDRWMSSQPYNARNMGPADTSYMTLASTTSTATDNMSEKTVEMDMIATPGPTNARSISPINPDFIDSSPLSNRHNHHVPPSPNRRYMAPTQSAKAKVRAQGPSKPRVSGGPHWNSSIKGGSTCDSSSSGGGITAYQIPRSPGPKINGIRSQSRRIVGSSPDYIEDWALPLGAHGWA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00484 458 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Lapu8g00484 458 SMART iq_5 136 157 IPR000048 GO:0005515
Lapu8g00484 458 SMART iq_5 113 135 IPR000048 GO:0005515
Lapu8g00484 458 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Lapu8g00484 458 MobiDBLite consensus disorder prediction 1 38 - -
Lapu8g00484 458 MobiDBLite consensus disorder prediction 348 430 - -
Lapu8g00484 458 MobiDBLite consensus disorder prediction 18 38 - -
Lapu8g00484 458 MobiDBLite consensus disorder prediction 52 73 - -
Lapu8g00484 458 Pfam IQ calmodulin-binding motif 141 156 IPR000048 GO:0005515
Lapu8g00484 458 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Lapu8g00484 458 Gene3D - 89 139 - -
Lapu8g00484 458 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Lapu8g00484 458 Coils Coil 223 243 - -
Lapu8g00484 458 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00484 Lapu-Chr8 21485534 21492103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00484 1 426 IQD Protein Family AT3G49260 48.922 2.62e-101 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00484 - - gmx:100798026 595.89