Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00483 ATGAAGACGCCAAACAGCCACTCGCCGTCGGGAAACGGTGTCCGGCGAGTGGAGCCCGATTCCGGCCAGTTTCTCACGACGTTTAAGAACGGTCGCAAGCGAAGGCTCAAAATCCGGCAAATGAAATACACTTGCCAGGCGAAGATCCGCCTCAGGAATGGCACCGTCGGCGTCTCCCCTCCTCCGGCCGACGAACTGGAGGGAGGGAACAGAGAGATTCATGAGCACGTGGAGATATCGCTGTCGCTGGCGGCGGCGTCGTCATCGGAGGAGGAGGAACGGTCATCGTCGGAGCAAAAGGACGGCGTTTTGTCGTACGGGTCAACGTCGGTGATTGGGAGCAGGAAGGATATGGAGGATGCGGTGAGTGCGGAGATAGGGTTTGCAGCGAAGGAGAGAGGAAAGTGCGACTTCTTTGCGGTGTACGACGGCCACGGCGGAGCCCAAGTGGCGGAGGCGTGTCGGGAGCGATTGCACCGGCTGGTTGCGGAGGAGGTGGAGAGTAGTGAGAGTCATGTGGAATGGGACTGGCAGGGAGTGATGGAAGGGTGTTTCCGTAAAATGGACAGCGAGGTCGCCGGTAATGCGGCCGTCAGGACTGTCGGTTCCACGGCGGTTGTGGCCGTCATCGCGGCGGAGGATATTATCGTAGCTAATTGCGGTGATTGTAGGGCTGTGTTGGGAAGAGGAGGTGAGGCTGTGGAATTGTCCAGTGATCATAAGCCCGATAGGCCTGACGAGTTGGTGCGAATCGAAGAGGCTGGTGGAAGGGTCATTAACTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCTACTTCACGATCCATAGGAGATCAGTACCTTCGACCTTATGTAATATCAAAACCAGAAGTGACAGTGAGCAAGAGAAGCAGCAAGGATGAATTTCTGATACTAGCAAGTGATGGATTGTGGGATGTGATGTCCAGTGAAGTTGCGTGCCAAGTTGTGAGGAAATGCCTGAATGGGCAGATTAGAAGAGTGTGCAATGGACTTGGGAATCATCAAAACCGTGCTGCTGAGGCTGCAAGCCTCTTAGCTGAGATTGCATTGGCAAAGGGAAGTAGAGATAACACCAGTGTCATTGTAGTTGATCTAAGAGGAACAGTAACATAA 1134 0.5441 MKTPNSHSPSGNGVRRVEPDSGQFLTTFKNGRKRRLKIRQMKYTCQAKIRLRNGTVGVSPPPADELEGGNREIHEHVEISLSLAAASSSEEEERSSSEQKDGVLSYGSTSVIGSRKDMEDAVSAEIGFAAKERGKCDFFAVYDGHGGAQVAEACRERLHRLVAEEVESSESHVEWDWQGVMEGCFRKMDSEVAGNAAVRTVGSTAVVAVIAAEDIIVANCGDCRAVLGRGGEAVELSSDHKPDRPDELVRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVSKRSSKDEFLILASDGLWDVMSSEVACQVVRKCLNGQIRRVCNGLGNHQNRAAEAASLLAEIALAKGSRDNTSVIVVDLRGTVT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00483 377 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169
Lapu8g00483 377 Pfam Protein phosphatase 2C 106 365 IPR001932 -
Lapu8g00483 377 CDD PP2Cc 105 372 IPR001932 -
Lapu8g00483 377 FunFam Protein phosphatase 2C 51 98 377 - -
Lapu8g00483 377 MobiDBLite consensus disorder prediction 84 105 - -
Lapu8g00483 377 MobiDBLite consensus disorder prediction 1 23 - -
Lapu8g00483 377 SUPERFAMILY PP2C-like 102 373 IPR036457 -
Lapu8g00483 377 ProSiteProfiles PPM-type phosphatase domain profile. 105 372 IPR001932 -
Lapu8g00483 377 PANTHER PROTEIN PHOSPHATASE 90 372 IPR015655 GO:0004722|GO:0006470
Lapu8g00483 377 SMART PP2C_4 95 370 IPR001932 -
Lapu8g00483 377 Gene3D - 97 375 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00483 Lapu-Chr8 21475097 21478491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00483 106 373 PP2C-type Phosphatase Gene Family AT1G07430 49.842 4.39e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00483 K14497 - gmx:100807235 577.4