Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00482 ATGAAAAATAGTGTAAACGTAAATTTAAATAGGGACCAAGTTTGGTTCTATCTTGTTTTTTCCTTTCCCAAAACAGAACAAGCACCTACCTGCATAGCTGGGATGGCCGAGTTCAGTGTGCTACCCCTCCAAGGTGATTCCATATTGATAGCACTGTTGCTTATGTTCTTGCTTATCGGAAGTAGCAGCGCTCAAAACGAGTGCGCGAAACTGTCTTGTGGGCTTCAAGAACTGCCTATTAGATTTCCCTTCCAACTCGTACAGGGGATGAAAAGTGCATGTGATTCTCCCGGTTTGTGTCTATATTGTAGTGAAAATCACGAGACCATGCTTGTGCACCCTACAGTAAAACTCAGTGTCACATTCATAAACTACGAATCTCAGATTATTTACTTGAAAGATCCAGAAAATTGCCTTCCGAAGAAGTTTCTAAACCTCAACAATTTTACCATTCCTCCTTACGAATTTCATTCATCATATGGACGACAAACAGACTACTTAAACTTCTTCGATTGTTCTTCGCTAGGGCTTCCACACCTGAGAAACAGCGACCAGATGTACTCGAGTTCGCAAAATATGATTTATTGCCCGACTTACGTTTCTAACTCTGACGAAAGTGTCCTTCAATTGGACCTCACATCTTGTACCAAGATGTTCAACATCATTTCACAGGCCTCGGCATCTGACCTGCGGACAAATTCGTTGCGTTTGAGATGGTCCAAACCAAATTGTAGTGAGTGCGAAGCACAAGGCAAGAGATGCAAATGGAAGAACAACAGCACAACCGACATCGAATGTGTAGACTGCCATCGCAAACGAAGAATTCACATTCCCAGATCTTTAATTTTCACTGTTGCAGGTTCTATTGTTTTGGGGCTGGTGGTTATTGCTGTCTTTAACATAGTCCACCATTTTAGGAAGAAAGAAGAAGACCAAGCTAGAGTGGAGAAGTTTCTAGAGAATTACAGAGCAGACAAGCCTGCAAGATTTACCTATGCCGATGTTAAAAGAATCACAGGTGATTTTAAAGAAAAGTTAGGGGAAGGAGCTCATGGAGCTGTATTTAGAGGAAAACTTTCAAATGAGATTCTGGTTGCTGTGAAGATCCTCAATAATACTGAGGGAGATGGGAAGGATTTCATCAATGAAGTTGGAATCATGGGAAAAATCCACCACATCAACGTGGTTCGTTTGCTTGGTTTTTGTGCGGAAGGACTCCATCGTGTTCTTGTCTACAATTTGTTTCCAAACGGTTCGCTACAAAGCTTCATATTTCCACCGGACGACAAGGACCGTTTTCTTGGCTGGGAGAAGCTGCAACACGTTGCTCTTGGCATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGTGATCATCCCATCATCCACTTTGACATCAACCCTCACAATGTGTTGCTCGATGACAACTTCACTCCAAAAATTTCTGACTTTGGCTTAGCCAAATTGTGTTCAAAGAATCCTAGTTTGGTGTCCATGACAGCTGCAAGGGGAACCTTGGGATACATTGCACCAGAAGTTTTTTCCAGAAACTTTGGAAATGTGTCTTATAAATCTGATATCTACAGTTTTGGAATGTTGTTGTTAGAAATGGTTGGAGGAAGGAAGAACGTAGACATATCTTCTGCACAAAATTTTCATGTTCTGTACCCGGATTGGATCCATAACCTGGTTGATGGAGATATCCATATCCATGTTGAGGATGAAGGTGAAGTTAAAATTGCAAAGAAACTAGCAATAGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACCGACCATCCATAAAATCTGTCATACAAATGTTAGAAACTGCAGTGGAAAATCAGTTAACTGTTCCTCCTAACCCATTTCACTCAACGACTTCTACTGCTACTAACAGACTCACTTCAACAAGACGCCCAATGGAGTTGGAAGTGATTCAAGAATAA 1950 0.4149 MKNSVNVNLNRDQVWFYLVFSFPKTEQAPTCIAGMAEFSVLPLQGDSILIALLLMFLLIGSSSAQNECAKLSCGLQELPIRFPFQLVQGMKSACDSPGLCLYCSENHETMLVHPTVKLSVTFINYESQIIYLKDPENCLPKKFLNLNNFTIPPYEFHSSYGRQTDYLNFFDCSSLGLPHLRNSDQMYSSSQNMIYCPTYVSNSDESVLQLDLTSCTKMFNIISQASASDLRTNSLRLRWSKPNCSECEAQGKRCKWKNNSTTDIECVDCHRKRRIHIPRSLIFTVAGSIVLGLVVIAVFNIVHHFRKKEEDQARVEKFLENYRADKPARFTYADVKRITGDFKEKLGEGAHGAVFRGKLSNEILVAVKILNNTEGDGKDFINEVGIMGKIHHINVVRLLGFCAEGLHRVLVYNLFPNGSLQSFIFPPDDKDRFLGWEKLQHVALGIAKGIEYLHQGCDHPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSFGMLLLEMVGGRKNVDISSAQNFHVLYPDWIHNLVDGDIHIHVEDEGEVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLETAVENQLTVPPNPFHSTTSTATNRLTSTRRPMELEVIQE* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00482 649 FunFam PR5-like receptor kinase 415 620 - -
Lapu8g00482 649 ProSiteProfiles Protein kinase domain profile. 340 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00482 649 Pfam Protein tyrosine and serine/threonine kinase 342 609 IPR001245 GO:0004672|GO:0006468
Lapu8g00482 649 Pfam Wall-associated receptor kinase galacturonan-binding 68 134 IPR025287 GO:0030247
Lapu8g00482 649 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Lapu8g00482 649 Gene3D Transferase(Phosphotransferase) domain 1 415 622 - -
Lapu8g00482 649 FunFam serine/threonine-protein kinase PBS1-like 306 414 - -
Lapu8g00482 649 SUPERFAMILY Protein kinase-like (PK-like) 323 610 IPR011009 -
Lapu8g00482 649 Gene3D Phosphorylase Kinase; domain 1 312 414 - -
Lapu8g00482 649 PANTHER RUST RESISTANCE KINASE LR10-RELATED 310 628 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00482 Lapu-Chr8 21450885 21453151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00482 71 638 Receptor kinase-like Gene Family AT1G66910 32.960 1.06e-98 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu8g00482 PK_Tyr_Ser-Thr 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00482 - - gmx:100813531 916.376