Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00481 ATGGATATGGTTGCATACCAAACTAGTCAACCACGATTGTCTGCTGAACCTGTCTATTTCAATGATAAAACGGGTTGGGTGATTCGTTCAGAGCCGATTTCCGATTATATAGTTTTCATGAATTGTAGCGATCCAGTGAGAGACAATGGTAAGTATGTAGATACTTCTCCCTGCGTGAATTGGCACTCCAAAGGCTATATATATGCTATCGCTGGTGACTTAATATCAGAGGACATACAAGTTGGTTGCCATGTAAAGCTGGTAACTCCCACATCGTGGTGGGGTTTGCACACAGCTCAACATTCCTACACTGAGATGTACAAGGCCCTAGTGTATGGGTTTGAGATTTCGTGGATGATTGGAGCCTGCGAGGACATTTGTGGAAATCCAATGGATAGCTCCTGCAATTGGGACACTTCCGGGAAGGTTGAATGCTCGCTCAACTGCCACAGTTTCCTGCTGGGAATGTTGCATATATGTGATACTATTTATGCTGTCTGGATAGGTCTGGTTGAAACAATAAAAGGACAAATTGAAGGATTTGATTATTTCGGCAACTATAAACTAGGATTACTTATAGGACACTACGTTTTACCATTCTTCTGGGCTGGCAGACTTTTGTTTGGGATGACTTTATTTATTGCACTATTGATGTACAAATGGAGAAGTCGACATTTGTCGATGTACGAAAATATTGAAAATTACTTGGAGCATGCCAATTTGATGCCTATTAGATATTCATACAAGGAAATCAAGAAAATGTCGGGAGGTTTCAAAGACAAGTTAGGTCAAGGAGGATATGGTTCTGTGTTTAAGGGAAAGTTGTCTAGCGGACCTTCTGTGGCAATAAAAATATTAGGTAAATCAACTGGTGATGGACAAGATTTTATTAGTGAAGTTGCAACTATTGGAAGAATTTATCATCAAAATATAGTAAAATTAGTTGGATTTTGTGTTGAGGGATCAAAACATGCTCTTGTTTATGAATTCATGTCAAATGGATCTCTTGATAAAATTATTTTTTCAAAAGATGGAAGTATACATTTAAGTTATGATGAAATATATAATATTTCAATAGGAGTAGCTCAAGGAATTGCCTATCTTCACCATGGATGTGAGATGCAAATTTTACATTTTGATATCAAGCCCCACAACATCTTGCTTGATGGAAAACTTATCCCAAAGGTCTCTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATTGTCACAATGACAGGAGCAAGAGGGACAATAGGATATATGGCTCCAGAACTATTTTATAAAAATATCTCATAA 1305 0.3755 MDMVAYQTSQPRLSAEPVYFNDKTGWVIRSEPISDYIVFMNCSDPVRDNGKYVDTSPCVNWHSKGYIYAIAGDLISEDIQVGCHVKLVTPTSWWGLHTAQHSYTEMYKALVYGFEISWMIGACEDICGNPMDSSCNWDTSGKVECSLNCHSFLLGMLHICDTIYAVWIGLVETIKGQIEGFDYFGNYKLGLLIGHYVLPFFWAGRLLFGMTLFIALLMYKWRSRHLSMYENIENYLEHANLMPIRYSYKEIKKMSGGFKDKLGQGGYGSVFKGKLSSGPSVAIKILGKSTGDGQDFISEVATIGRIYHQNIVKLVGFCVEGSKHALVYEFMSNGSLDKIIFSKDGSIHLSYDEIYNISIGVAQGIAYLHHGCEMQILHFDIKPHNILLDGKLIPKVSDFGLAKLYPIDNSIVTMTGARGTIGYMAPELFYKNIS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00481 434 PANTHER RUST RESISTANCE KINASE LR10-RELATED 229 433 IPR045874 GO:0004672
Lapu8g00481 434 FunFam Os07g0541700 protein 331 420 - -
Lapu8g00481 434 Gene3D Phosphorylase Kinase; domain 1 230 330 - -
Lapu8g00481 434 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Lapu8g00481 434 SMART serkin_6 256 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00481 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Lapu8g00481 434 Gene3D Transferase(Phosphotransferase) domain 1 331 433 - -
Lapu8g00481 434 Pfam Protein kinase domain 259 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00481 434 ProSiteProfiles Protein kinase domain profile. 256 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00481 434 SUPERFAMILY Protein kinase-like (PK-like) 241 432 IPR011009 -
Lapu8g00481 434 FunFam serine/threonine-protein kinase PBS1-like 225 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00481 Lapu-Chr8 21447347 21450718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00481 212 432 Receptor kinase-like Gene Family AT4G18250 49.327 8.09e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu8g00481 Pkinase 2.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00481 - - gmx:100305367 546.969