Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00477 ATGCTAAATTCTCAAAATCTCTCTCTTCTGTTCACGGTGTTGTTGCTGCTATGGAAGCCTGCCATAAGCAAAAATGGGTGCACAGAAAAGTGTGGCCGCATTCGCATTCAGTTCCCATTTTACCTCAGAAATAGCAAGTTGAATCACACCACGGGCTATCCTCGTGGGTTCGATCTCTTGTGTACAGACGCAGATGAGACTGTGCTGGATCTGCCTTCTGTTCCAATAAAATTGTTTGTCAAAGGCATAGATTACAACTCACAGCAAATCCAACTCTACGACCCTCAAAATTGCCTTCCCAGGGAACTCATCAAGCTCGGCAATACCTCTATTTCTCCATTTAAATTCCAATCATTTGGGTACCGAAATGTTTCCTTCTTCCGCTGCAACTCAATGTCATGCCCAATTTTGCAACTTGGATCTGAAAATGACTTTCTTGTTCCTGAGATAGTATCTTGCACAAAGTTGAGTGATGTTTACTCCGTCCAGTGGCAAATACAGGATGAGTTGAAGAACACAGTGGTTGCGGAATGGACCAACCCCAATTGCAGTTCCTGTGAAGCACAAGGAAGTAAATGTAAATACAAGAATGGTAGCCAAAGTGAAATTGAATGTTTCGTTTGCCCCACAAACAGGCTTCGAACATCGACTATCGTACTTATTGCTGCAGAAGAAACAACAACAGGGGGAATAGGTGGTTTCATTCTTGTGCTGCTACTGGCCAAGGCTTTGTTTCATGTGTATGACCATTATAAGGTGAAAGGGGAAGACCAAGCTCGGATAGAGAAATTCTTGGAGGATTACAGGGCAATGAAGCCTACCAGATTCACTTACGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAAAGTTTAGGAGAAGGAGCTCATGGAGCAGTGTTCAAGGGAACGCTCTCCCGAGATATTCTCGTTGCTGTGAAGATACTCAACGACACAGTTGGAGATGGAAAGGATTTCATAAACGAAGTGGGAACCATGGGCAAAATTCATCATGTTAATGTTGTCCGCTTGCTTGGATTCTGTGCGGATGGATTCCACCGAGCTCTTGTCTATGATTTCTTCCCAAATGGGTCACTGCAGAGGTTCTTGGCTCCACCAGACAACAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCCCTTGGTGTTGCTAAAGGGATTGAGTATCTCCATCTGGGGTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTAATAGATGACCACTTCAATCCAAAGATCACTGATTTTGGACTTGCTAAATTGTGTCCTAAAAATCAAAGTACTGTGTCTGTGACAGCAGCCAGGGGAACCTTAGGCTACATTGCCCCAGAAGTTTTCTCAAGAAACTTTGGTAATGTATCTTATAAATCTGACATTTACAGTTATGGAATGTTGCTCCTGGAGATGGTTGGAGGAAGAAAGAATACAAATATGTCTCTAGAGGAAAGTTTCCAAGTTCTGTACCCAGAATGGATCCATAATTTGCTGGAAGATCGAGACGTGCAAGTCACAATTGAGGAAGAGGGAGATGTTAAAATTGCAAGGAAACTTGCCATTATAGGACTTTGGTGTATTCAGTGGAACCCAGTGGACCGTCCATCCATGAAAACTGTGGTACAAATGCTTGAAGGAGATGGAGACAAGTTAGTTGCACCCGCTACTCCTTTTGACAAGACCAGTTCTTCAAGAACAAATGCAAGTGTTCCAATAAGACACCAGAATTTCGAGTTGGAAATTATTCATGAAGACGAAGAGTAA 1800 0.4256 MLNSQNLSLLFTVLLLLWKPAISKNGCTEKCGRIRIQFPFYLRNSKLNHTTGYPRGFDLLCTDADETVLDLPSVPIKLFVKGIDYNSQQIQLYDPQNCLPRELIKLGNTSISPFKFQSFGYRNVSFFRCNSMSCPILQLGSENDFLVPEIVSCTKLSDVYSVQWQIQDELKNTVVAEWTNPNCSSCEAQGSKCKYKNGSQSEIECFVCPTNRLRTSTIVLIAAEETTTGGIGGFILVLLLAKALFHVYDHYKVKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGTLSRDILVAVKILNDTVGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDNKDVFLGWEKLQQIALGVAKGIEYLHLGCDHRILHFDINPHNVLIDDHFNPKITDFGLAKLCPKNQSTVSVTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSLEESFQVLYPEWIHNLLEDRDVQVTIEEEGDVKIARKLAIIGLWCIQWNPVDRPSMKTVVQMLEGDGDKLVAPATPFDKTSSSRTNASVPIRHQNFELEIIHEDEE* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00477 599 FunFam PR5-like receptor kinase 361 567 - -
Lapu8g00477 599 FunFam serine/threonine-protein kinase PBS1-like 254 360 - -
Lapu8g00477 599 PANTHER RUST RESISTANCE KINASE LR10-RELATED 258 574 IPR045874 GO:0004672
Lapu8g00477 599 Pfam Protein kinase domain 290 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00477 599 Gene3D Transferase(Phosphotransferase) domain 1 361 565 - -
Lapu8g00477 599 SUPERFAMILY Protein kinase-like (PK-like) 268 557 IPR011009 -
Lapu8g00477 599 Gene3D Phosphorylase Kinase; domain 1 260 360 - -
Lapu8g00477 599 ProSiteProfiles Protein kinase domain profile. 286 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00477 599 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Lapu8g00477 599 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00477 Lapu-Chr8 21412264 21414607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00477 31 569 Receptor kinase-like Gene Family AT1G66910 35.149 1.21e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu8g00477 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00477 - - gmx:100819302 1026.16