Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00455 ATGCCTGAACTCCGAACCCGAAGAAACCGGGCAACGTTCCATGACCCAAACCCAAACCCGAACCCGAACGTCCTAACCCGCCAGAGGAGAACGAGAAGAACAACCATCAACAGCAAGAGGAACAATCGCAACACGCTCGCACGTTGTAGAATCGGTAACCGTGAATTAGAAGAGAAGGAGCAGCAACAACAGCAACAACACGCGCCCCTGCTTAGGATTTCGGTAGAAGATAAGGAGAAAGTGATGGATGACGAGTTCGACAGCGGCGGTGGCCGGAGCGCTGACAAGGCTCCGCCCGCCGAAGACGAAGGAAGCGCTGCTCCCATCCCCGAGAGGGTACAGGTAGGTGGTTCTCCGGTGTACAAATTGGACAGAAAACTTGGGAAGGGAGGGTTTGGACAGGTTTACGTAGGTCGGCGAGTTGTGGCTGGTGCCGGAGCGTTAGAGGTAGCTTTGAAGTTTGAACATAGAAGCAGTAAGGGGTGCAATTATGGACCTCCATACGAGTGGCAGGTTTACAATGCATTGGGTGGTAGTCATGGTGTTCCACGTGTTCATTACAAGGGACGACAAGGGGATTACTATGTTATGGTCATGGATATGCTAGGCCCTAGTCTGTGGGATGTCTGGAATAACAACTCAAACTCAATGTCTGCAGAAATGGTGGCATGTATAGCAATTGAGGCCATCTCCATATTAGAGAAGATCCATTCTAAAGGATATGTGCATGGTGATGTAAAACCTGAGAATTTTTTGCTTGGCACCCCTGGAACTGCTGATGAGAAAAAGCTTTTCCTGGTTGATCTTGGATTAGCAACCCGTTGGCGGGATAGTTCTACTGGCCTTCATGTTGAGTATGATCAACGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGAAGCAGGAGAGATGATCTGGAATCTCTTGCTTACACATTAATTTTCCTTCTTCGTGGTCGATTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCAACCTCACCAGAAGCTTTGTGTTGTGTCTGTCCTCCACCTTTTCGGCAGTTTGTGGAGTATGTAGTGAATTTGAAGTTTGACGAAGAACCAAATTATGCAAAGTATATATCACTTTTTGATGGAATTGTTGGACCAAATCCAGACTTCAGACCCATAAATACTGATGGTGCACAAAAGCTTATATATCTGGTTGGACATAAGAGAGGACGAGTAACTGTGGAAGAAGATGATGATGAACAACCAAAGAAGAAAGTTAGAATGGGAATGCCAGCAATGCAATGGATTAGTGTGTACAATGCCCGCCGGCCAATGAAGCAAAGGTACCATTACAATGTTGCTGATGTGCGGCTGTCCCAACACATCGAAAAGGGATATGAGGATGGGTTATTTATCAGCAGTGTGGCTTGTTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCTCAAGTTCATGAACTCTCACCCCACTTTCTTCATAAGGAATGGATAATGGAACAGTGGGAAAATGGTTATTACATTAGTGCAATAGCAGGATCTAATAATGGGAGCTCGTTGGTTGTAATGTCTAAAGGGACCCAATACTTGCAGCAATCCTATAAAGTCAGTGAATCATTTCCATTTAAGTGGATCAATAAAAAATGGAGAGAGGGATTTTCTGTCACTGCTATGGCCACTGCTGGGAGTAGATGGGCAATTGTAATGTCCCGTGGTGCTGGATATTCGGACCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGCATTCATCGTAGGTGGGACAATGGTTACCGGATCACTTCAACTGCTGCTACATGGGACCAAGCTGCTTTTGTCCTTAGTGTGCCAAGAAGAAAACCGGCTGATGAAACTCAAGAGACACTCCGCACATCTGCCTTTCCTAGTAGTCATGTCAAGGAAAAATGGTCAAAAAATCTCTATATTGCATCGATATGTTATGGGAGAACAGTTTCATGA 2046 0.455 MPELRTRRNRATFHDPNPNPNPNVLTRQRRTRRTTINSKRNNRNTLARCRIGNRELEEKEQQQQQQHAPLLRISVEDKEKVMDDEFDSGGGRSADKAPPAEDEGSAAPIPERVQVGGSPVYKLDRKLGKGGFGQVYVGRRVVAGAGALEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSNSMSAEMVACIAIEAISILEKIHSKGYVHGDVKPENFLLGTPGTADEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCVCPPPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDFRPINTDGAQKLIYLVGHKRGRVTVEEDDDEQPKKKVRMGMPAMQWISVYNARRPMKQRYHYNVADVRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVHELSPHFLHKEWIMEQWENGYYISAIAGSNNGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWREGFSVTAMATAGSRWAIVMSRGAGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSSHVKEKWSKNLYIASICYGRTVS* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00455 681 SUPERFAMILY Protein kinase-like (PK-like) 121 397 IPR011009 -
Lapu8g00455 681 Gene3D Transferase(Phosphotransferase) domain 1 94 431 - -
Lapu8g00455 681 ProSitePatterns Protein kinases ATP-binding region signature. 127 153 IPR017441 GO:0005524
Lapu8g00455 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Lapu8g00455 681 ProSiteProfiles Protein kinase domain profile. 121 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00455 681 PANTHER CASEIN KINASE-RELATED 118 649 - -
Lapu8g00455 681 CDD STKc_CK1 121 390 - -
Lapu8g00455 681 FunFam casein kinase 1-like protein HD16 94 437 - -
Lapu8g00455 681 Pfam Protein kinase domain 121 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00455 681 MobiDBLite consensus disorder prediction 1 115 - -
Lapu8g00455 681 MobiDBLite consensus disorder prediction 13 31 - -
Lapu8g00455 681 SMART serkin_6 121 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00455 681 MobiDBLite consensus disorder prediction 72 99 - -
Lapu8g00455 681 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00455 Lapu-Chr8 20948598 20956155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00455 120 276 EF-hand Containing Proteins AT4G35310 27.950 7.59e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lapu8g00455 Pkinase 3.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00455 - - pop:7476691 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00378 6 3774974 3801525 Lapu8g00455 8 20948598 20956155 PCT