Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00439 ATGTCATTGGTTATATCTACAGAGTTGGCTGATACAACATATAGGAATGCGAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCTCACAATTTTGTTCCGGATAAGCACAGAAACATGTATATCACGGATTCTTACTCCAGTGAGAGTTATGAAAAGTACTTCCGTGATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAATTCGGTTAACCCTGATGGTGCCTCTTCTTACATGCTCAGAGCTAGTTCCGGAGCTTCTGTGATTGTTAATAACCCCTTTGACACCTGTACCATGTCTACAAGGCGTCACAATGCATATCAGTCCAATTTTGAATCAGATTTGGTGGAAAATAGGAGCCCTGATGGCTTTGACTTTGATGGTGAAATGAGATTAAAACTACAAGAATTGGAGAGGGCTTTGTTTTCTGATGAAGAGGAGGAGGAGGAAGACGTATTTGAGACTGTTCAAAGCATGGAGATTGATTCTGACATGGCCCAGTGGGCCAATCCCCTTCAAGATATGCTACTTCATGACTCACCAAAGGAGTCCTCATCCTCAGATTCTTCCAATATTAGCAGCATAAGTAGCACCACCAGAGAAACTTCACAAAACTCGCCCCGTACCCCCAAACAATTACTTTATGATTGTGCTAGAGCACTTTCAGAAGGAAACGAAGAGGAAGCCACATCTATGATAAACAATCTCAGGCAAATGGTCTCAATTCAGGGGGATCCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGCGTTGCTTCATCTGGAAAATGCATCTATCGAGCATTGAGATGCAAGGAACCTCCTTCTTCAGATCGCCTGGCAGCTATGCAGATCCTATTTGAGGTGTGCCCGTGTTTTAAATTCGGATACATTGCTGCAAATGGGGCGATAGCTGAGGCTGTTAGAGATGAAAAGAAGGTTCATATAATAGACTTTGACATCAGCCAAGGAACTCAGTACATAACTCTAATACAAACACTTGCTTCTATGCCAGGTAGGCCATCTCATGTGAGATTAACCGGGGTGGATGATCCTGAGACTGTGCAGCGCTCCATTGGTGGCATGAAAATCATAGGACAAAGGCTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTTGAGTTTCGAGCAGTGGCTTCGAAGACCTCAATTGTTTCACCATCAATGCTCAATTGTCGTCCGGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTGTCCACAGTGAACGAGAGAGACCAACTTCTTCGCATGGTTAAGTGCTTGAATCCAAAACTAGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTTTGCTGTGTTTGACACTCTTGACGCAACTCTACCTAGGGAGAGCCAGGACAGGATAAATGTTGAAAGGCAATGCTTGGCAAAGGACATTGTCAACATTGTGGCCTGTGAGGGCGAGGATCGGATAGAACGGTATGAACTCGCCGGAAAATGGAGGGCAAGGTTGACAATGGCTGGCTTCACTCCATCCCCAATGAGCACAAATGTGAGAGAAGCAATTAGGAAACTCATTATTAAGCAGTACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAGCTTGATTGTTGCTTCAGCATGGAAGTGA 1776 0.4443 MSLVISTELADTTYRNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSESYEKYFRDSPSEELIEPSSSSISGNSVNPDGASSYMLRASSGASVIVNNPFDTCTMSTRRHNAYQSNFESDLVENRSPDGFDFDGEMRLKLQELERALFSDEEEEEEDVFETVQSMEIDSDMAQWANPLQDMLLHDSPKESSSSDSSNISSISSTTRETSQNSPRTPKQLLYDCARALSEGNEEEATSMINNLRQMVSIQGDPSQRIAAYMVEGLAARVASSGKCIYRALRCKEPPSSDRLAAMQILFEVCPCFKFGYIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPSHVRLTGVDDPETVQRSIGGMKIIGQRLEKLAEELGLPFEFRAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKCLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYFAVFDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDRIERYELAGKWRARLTMAGFTPSPMSTNVREAIRKLIIKQYCDRFKIKEEMGALHFGWEDKSLIVASAWK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00439 591 MobiDBLite consensus disorder prediction 187 220 - -
Lapu8g00439 591 Pfam GRAS domain family 221 591 IPR005202 -
Lapu8g00439 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 197 586 IPR005202 -
Lapu8g00439 591 MobiDBLite consensus disorder prediction 61 80 - -
Lapu8g00439 591 ProSiteProfiles GRAS family profile. 211 591 IPR005202 -
Lapu8g00439 591 MobiDBLite consensus disorder prediction 66 80 - -
Lapu8g00439 591 MobiDBLite consensus disorder prediction 189 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00439 Lapu-Chr8 20582016 20586090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00439 1 591 GRAS Transcription Factor Family AT1G21450 60.768 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu8g00439 GRAS 1.6e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00439 - - gmx:100807048 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00439 8 20582016 20586090 Lapu8g00439 8 20582016 20586090 ECH