LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu8g00432	ATGGAAGTGAAGAACACGCTGAAGCAACTGACCAGACTGACCGTGGTGTTACTGATGGCTTTAGCAGCAGCCAGCCAAGCCCTGCGCGGCTGCCCGAACTCCTGCGGCAGTGTTTCATCAATTCCCTATCCATTTGGCGTGGGCAATTCATCCGTCAGCGGTGAAAACTGTTTCTTGGAGAAAGAGCTGGAGCTTACATGCACCAACTCAACCCTATATCACGGTCAAGGTAACGTCCAAATTCTGAACATAAGCCTCACTGGTAAAATGGACATGCTCACCTTCATCTCCGAAGTTTGCAAAACCGAATCTCTGGGAGGAGTAGAAACACAAGGTAGCATATCCAGTCTCAAAACACCGGCTTTCACAATTTCTAGCGAGGACAACAAGTTCGTAAGCGTAGGGTGCGACAGCTACGGCTATCTCAACAGTTACCAGAACGGTACAAAATCTTCGACGGGGTGCTTGACGAGATGCGACAGCAAAAAGAGCGTTGAAAGCATGCAGAGAAACGGAAACTGTATGGGCATAGGGTGTTGCCAGGTGGACATTCCTCCTGGGATGAAGAATATCAGCTTGCAAGCATTCAGCTTCAAGAATTTCAATTCCACTTCCGATTTCAACAAGTGTGGCTACTCCTTTGTGGTAAAAAATGGCAACTATACTTTCTCCGTTGATCATTTAAACGGCCTCCCGTTCACCATGGCACGCCTTGTCGTGGATTGGAGTGTTGGAAACGACACCTGCGAGGTTTCCAGGCTTAGAGGAGATTATGCATGCAAGAGTTATTATAGCGATTGTGAAAACTCGCCCTCTGAATATGGTTACCGATGCAACTGTAAACCAGGCTTCGAGGGAAACCCATACCTTGTCGATGGTTGTCAAGACATGCCGAATTGTACAAATAACCAACACAATTGCGATAGTGAAGATCATTGTCGTGAAACTCCTGGCTCATTCGAATGTTTCTGTCCTGATGGACTGATGGGAAATGGGACAAAAGAAGGCGGAGGATGCCAACCAAGGCAGCGGGCTGATGCATTTACGAAGATCGTCATTGGCTCTGGAGTAGGATTAATTTCTCTATTTATAGGAGTTTCTTGGTTGTACTTGATATACCAGAAAAGGAAAGTCCTCAGATTAAAGGAGAAGTTCTTTCAGCAGAATGGAGGCATCTTTCTAAAACAGCAGCTCTCTACAAGAGAAGAATCGTCTCAATCCACTACAATTTTCAGTGTAGAGCAACTCAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCATAGGTAAAGGAGGTTATGGTACAGTGTTCAAAGGAGTTCTCTCAAATAACAGAGTTGTGGCTATCAAAAAGTCCAAAATAGTGGATCAAAGCCAGATAGAGCAGTTCATTAATGAGGTCATTATATTATCACAAATTAATCATAGGAATGTGGTCAAACTCTTGGGATGTTGTCTAGAGACAGAAGTTCCTTTACTGGTCTATGAATTTGTTAACAACGGTACCCTTTTTGATTACTTACATAATCAAGACCAGGTGGTTAATGCATCTTGGAAAACGCGTCTAAGGATAGCTACAGAGGCAGCTGCAGCTCTATCATATCTGCACTCAGCAGCTTCCATACCCATCATCCATAGAGATGTGAAGACTGCCAACATACTTTTAGATGACACTTACACTGCCAAAGTGTCCGACTTTGGAGCTTCAAGATTGGTTCCGCTTGACCAAACTGAAATAGCTACAATTGTGCAAGGAACCTTTGGCTATTTAGACCCAGAGTACATGCAAACAAGCCAATTGACAGAAAAAAGTGATGTATATAGCTTTGGGGTAGTGCTTGTAGAACTACTAACAGGGGAGAAACCTTTCTCTTTCGATAGGGTAGAAGAGAAACGAAGTCTTACAGTTCACTTTCTATGTAGCTTGAAAGAAGATCGTCTGTTTGATGTTCTTCAGATTGGTATTCTAGATGAAGAAAATAAGCAGGAGATTATGAAGGTTGCTATTCTTGCTGCCAGGTGCCTGAGACTTAGAGGGGAGGAAAGGCCCAGCATGAAGGAAGTGACAATGGAATTAGAGGGAATAAAGCATACGGAGAGACACCCTTGGATCAAAACAGGTCAAAATTTTGAGGAGAGTCAATACTTGCTTCATGAGGCCCAAAGTTCATATGAACATGGTGACTCCAGTTGCCAACAGAGTACTGGATATGATAGCTTGAGAGAACTTCAATTAATTGACTTTGGTAATGGAAGATGA	2262	0.4346	MEVKNTLKQLTRLTVVLLMALAAASQALRGCPNSCGSVSSIPYPFGVGNSSVSGENCFLEKELELTCTNSTLYHGQGNVQILNISLTGKMDMLTFISEVCKTESLGGVETQGSISSLKTPAFTISSEDNKFVSVGCDSYGYLNSYQNGTKSSTGCLTRCDSKKSVESMQRNGNCMGIGCCQVDIPPGMKNISLQAFSFKNFNSTSDFNKCGYSFVVKNGNYTFSVDHLNGLPFTMARLVVDWSVGNDTCEVSRLRGDYACKSYYSDCENSPSEYGYRCNCKPGFEGNPYLVDGCQDMPNCTNNQHNCDSEDHCRETPGSFECFCPDGLMGNGTKEGGGCQPRQRADAFTKIVIGSGVGLISLFIGVSWLYLIYQKRKVLRLKEKFFQQNGGIFLKQQLSTREESSQSTTIFSVEQLKKATNNFDESLIIGKGGYGTVFKGVLSNNRVVAIKKSKIVDQSQIEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHNQDQVVNASWKTRLRIATEAAAALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFDRVEEKRSLTVHFLCSLKEDRLFDVLQIGILDEENKQEIMKVAILAARCLRLRGEERPSMKEVTMELEGIKHTERHPWIKTGQNFEESQYLLHEAQSSYEHGDSSCQQSTGYDSLRELQLIDFGNGR*	754

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu8g00432	753	ProSitePatterns	Protein kinases ATP-binding region signature.	429	452	IPR017441	GO:0005524
	Lapu8g00432	753	Pfam	Protein kinase domain	427	690	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00432	753	Gene3D	Phosphorylase Kinase; domain 1	389	498	-	-
	Lapu8g00432	753	FunFam	Wall-associated receptor kinase 2	499	716	-	-
	Lapu8g00432	753	FunFam	Wall-associated receptor kinase 2	393	498	-	-
	Lapu8g00432	753	Gene3D	Transferase(Phosphotransferase) domain 1	499	718	-	-
	Lapu8g00432	753	CDD	EGF_CA	291	330	-	-
	Lapu8g00432	753	CDD	STKc_IRAK	429	696	-	-
	Lapu8g00432	753	SUPERFAMILY	EGF/Laminin	300	333	-	-
	Lapu8g00432	753	SMART	serkin_6	423	705	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00432	753	Gene3D	Laminin	246	338	-	-
	Lapu8g00432	753	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	23	699	IPR045274	GO:0007166
	Lapu8g00432	753	SMART	egf_5	299	340	IPR000742	-
	Lapu8g00432	753	SMART	egf_5	248	295	IPR000742	-
	Lapu8g00432	753	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	544	556	IPR008271	GO:0004672\|GO:0006468
	Lapu8g00432	753	ProSiteProfiles	Protein kinase domain profile.	423	705	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00432	753	SUPERFAMILY	Protein kinase-like (PK-like)	401	694	IPR011009	-
	Lapu8g00432	753	Pfam	EGF domain	300	333	IPR024731	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu8g00432	Lapu-Chr8	20373269	20376403	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu8g00432	25	753	Receptor kinase-like Gene Family	AT1G21230	44.054	0.0	575

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Lapu8g00432		Pkinase	1.9e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu8g00432	-		-	gmx:100819535	1179.47