Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00426 ATGGATAAGCACCACTTTCTCCACCACCACCACCACTATCACCACCCCCAGGACCACCGCACCACCCGCTACACTTCCCTGAACCCTCAATCGCATCACCACCACCACCATAACAACCTCCCTCCGCCACCGTCCGCTCCGCCGCCGCCCCTCTCCTACCACCGCACCCTCCACACTCCTCCGCCGCCGCAACCCTACACCCCTCCCACACCCCAACCCCAACAACAACAGCAGCAGCAACAATTCTCTTTCAACCACCACACGACTCTCCCACACCGCTCCCTCGAAGACGATTCACGTTCTCTCCCCTACGACCTCCTCCCTCGCCACACCACCGCCATCCCCTGGAACCCTAACCCTAGAACTGACGATTTCGACCGCGAATTCCACCATCACCACAATCGGCCGCCTCCGCCGATCGAAACCCTCCGCTACGATCCCGGACGCCGTGACCGCCTCGTGGTGGATCACTACGAGCAGAACCCCAGGGAGGCACTCGAGTGGAGCGGCGGTAACTACCACGCACCGAGCCAGGGTGACGTAGAGCCCGCGCCCTACGTGCGCGTGTACAGCGTGGAATGTGATGCTGACGTGGCGGGTAGAGGCTCCCGGGTCGAGAGCAAGAGGTGGGTGATGAGTGATAGAGAGAGGGAGAGAGGAAGAGAGTTGCACGAGTCTTCTTCTAATTTAGTTAACAATGGTAGTAACAGTGACAAATATTATCATGGTTCTGATAATGTGGGTAGGTATAGTAGAGGCAATAGTAGAGAGTGTGGTCATGAATTCGCACGCACTCCTCCTAAGAAACAGGTGCAGAAGAAGAGTGCTCTTCTTAGGATTCAGACTGTTAAACCTAATCATAGGAACCGTGAGGTTGAGCAGTTGAGGTACCCAGGTTATGGACCTGAAGGTAACAATGGTTTTTTCAGGGGGAAGGAGCAATATTTGGCTCATGGGAAGGGGGAAGAGAGAGAAGGGAGTCCTGTTGAGATTGATATCTCTTTTGAGTCCAATTCTCTGGTGGCGAAGGCTATTGTTGCGCCGCCTTCGAGTTCTGTGTCTGTTCCTGATTTGAATGTGACGCCGGTTCTGGATTCGGATTTGGGTTCTGGGGAGAAGAGTAAAAGGGTTTTGGGCTCTGATGGCTATTCTTCGGGTTTGCAGCAGCCGTTTAGAGTGTCATCTGTTGTTGTGGATTTAAATAGGTCGCCTTGCAAAGGGAATGATAGGTCTGGTTTGGGGAAGGAGGTTAACATGCGGAAGAATGTTGAGGATAATTCTTCTCGATCTCGCACCAGGGAGGCTGATGATTCTCGTGGCAAAAATGTGGTGCCAAATTTGGTTAAAGTTGACAGTGTGTGTTCTGGTAAATCGGCCACGAGGGTTGTCAAGAAGAAGAAAATTGTTAAGAGAGTGGTGAAGAAAGCTACTGCGAACTCTAAGACATCTGTGTCAAATTCACTACCGGCAAAAAGGCTTCTTGGAACTGTGAAAGTGGAGAGTGCTGCACTGACTACGTCAACTGCCTCTGTTCCTGAGAAAATTGAATCTAATTCAGATGAGAAAAGCAACATTGTTGGTGAGGTGGCTGGGTCAGAGCGCTTGCACTCTTTGCCAAAGGAAGGTAACGTATTGAAAGAAGATAAAGAGGGAGGCTTACTGCAGCTGAGTTTGGGGCGAGATTCCACATCGCAAGAGTGTAAGAGCGACAAAGATTCTGATAATAGGGAAGTATCCAGGTTTGAAATTGAAAGAGATGGAAACATTCCAAATTTTCCATCTTGTGCTTCTAGTAGTGAAGATAAGAAGAGTGATTCACATTGTCTAGATGCAAATAATAATGTCCTTAATAATGGAAATATTATTTCTGTGCATGATAATGCAAATACTTCCGATTGTTTAGATGCTGATAACTCTGTTCCAAATACTGACATGGTTACTAAATTCCTAGGTGGGAGTACTATTTCTGAAGTCAATCACATGGATTATGATAATAAGCAACTAGGTCAGAATGAAGTGTCATCACTTGGGAAATATTCAAATGTACAATCCCCACGGAATAGCAATCTTGCAGATGTAGGGAATGAACTATTAAAAACCAGTGAAACTTTTTCAAGTTCAAGAAAAACTAGGATTCAAGATGGTCTAGATTGCGTACAACATGCAAGTGCACTGAAGCACACTTCTGATAATGGATCATCTAATTTAGAAGATTGTATTAGTGTTCACTGCTGTGGTATCATGGATGATGCTGGAAAGCAATTGACCCATGGTGATGTCACCATAAACCCTGAGAATTGTGAGACAGAAAAAACATTCCCAAATTCTAATATTTTAGATGAATCTGGTGAAGGGGACACAAAGAATATAAAAAAGAGAAAATCTAGAACACAATTAAATTTTTTGAGTTCAGAGACGGAGTCCTTATCTCCTCATCATGTAAGTCCAGTTAGCATTGCAAATAATGTGGATGGAGCTCCAAGTCTGTTGTCGACAGATCCATCTGCTTCTGAAGTTTTAGATCAATCTGCTCAAAACGATGTTGACTCAATAACTGGTCTGGATGGGGTTACTGCTTTACATGAGAAAGGGGGGGTTTTGGAGAGACAGTTTTATCCTGCAAATAACAGCATTGATGATGCAAATGAGGTTTCACCAACTTCTAAAAGGAAAAAAGTCACAGCTAAGCCAAATTTCACTCACTGTAAATCGGAAATCAGTGCTGTGATTGTGGTTACCACAACATCTAATGCTGAAGCTCCTGTCAATTTCAAAGATAACCAAGAACCTCAGAAAGAAGTTGCTTTGTCAAGCATGGGTATGTGTATTCCGTCTTCTGCTCAGTCAATGCCTTATTATTTGGAGGATGTTAGTAAAATGTCGGGCAATATTTTGAGTGGAGGATCTTTTGACTCTATTGATGCAAATAGGGAAACTAGTTCTGAGCATTTGGAATTACAAAACTCAGATATAGTCTCTTTTTTACCATGTGAGGACTTGGCATCTCCAAACGATCAGTTCTCACCTTTGGAAGGTGAGTGCAAAGAAAACATCACTCCAGTCGTGCTTGTGAGTAATACTCAAACTGATGTTTTAGGTGTTGGAAATATAATGGGAGAAAAGACTGATTTACAGGTCATTAAGGAAAATCACCAATATAGAGACTTTGTGCAAAGGTCACCAAAAGCTGACATGGAACCTAATGATCTCAATATGAAGAATGATTTGCTTGCTCAGCAGAACCGTATGTCCTATCCAGCCAGTGGTGACGAACTCACTACTACAAGTAATTTGAATGATGAATTGATGATTGTGGATGCACCTGCTGCATTATCAGACATCTTTTCTGAAGGGATGACATCTGAAGTACCGGATAGAAGGATTTTAGAATTTACAGCAATCAATGATGAAAATATTTGTGGAGTTGAAGAAAATACTTCTTCAGTACAGCAGACGAAACAAAATAATAGGTCAGATCGTGCAATTGGGCACGGTAATATGATGACAAAGAAAACAATTTCAAAACCATCCCAAGTTTCTTCTAAAGTTACAACTCAGGCTCTAAATTCATATCGTTTTGGGTTGAGTGGGACCAAAAACCAGTCAGGTAGTGTCATTACCAAAACTTTTCAAGGTCATTCTTTCACCCTTTCAAAGTCAAAGACAAAGACATCTGCCTCTTCAACTCATGTATCAAAGCCTCGAACTTGGCATCGTACAGGTAATAATCCTCCTGTTTCTCTACCTAGAATCAATTCAGTAGGAACCGCTCCACCCAAAAGGCCAATTCTAGAAAGGAAAGGGAATTTTCAAAATACCTCGTATGTGCGTAAAGGAAATAGTCTTGTAAGGAAACCTACTCCAGTTCCTGCTCTTCCTCAAATCTCCTCTGTTCATCAGTCATCTTCTCCGGGCTTTGATGAAATATCAAAAAGCACTAAATCTGAAAGCAGGGCTGATGTGGCAGATCAACCAATGTACCTGAGAGCAGGAGCAACATATTCTCAGCAGAGGCAGAGAACACCTCCACCACCAATTGATACCAAATCAGAGGAAAATACATCTTCCTCACATGTAGAACCTCCTTCTGGTGGTTCCTGTGAAAATATATCAGATCCTACGACATTTGTAGAAATTAATCATAATGCACGGAACTCATCTGAAGATGCACTGAAGCATTATGAAATTCCAGAAAACCAACCTGGTCCATCTGATAACGGGGAGGGTCAAGTTGAAGCAAATGATAGAAATCCTTTTTCCCTGAATACAAAGAGAATAGTATATATAAAGCCGAAAACAAATCAATTGGTTGCAACATCAAATAAGTGTGATGTTTCTGTTTTCACTGATGACAATGGCCAAACTGCCCTCTCTGATGGCTACTACAAGAGAAGAAAAAATCAATTGGTTAGGACTACATTTGAAAGTCACAACCAGACTGCTATAGTGCCTAATAATAGCACGGCAAATTCTGATGGACAAGGAACTAGCAATGCTCTTTGCAACAGGAGGTTTAGTAAAAAGCGGTTACATAAGGTTGCCAGAAGTTCATGTAAACGTTCTAGAGCCTCCCTAGTCTGGACACTCTGTAGCAAAAATTCTTCTGAAAATGACAGGAACTCACGTCATTATCGAAAGGTTTTGCCTCAATTGTTTCCATGGAAAAGATCAACATTTGCTTCAAGTTTCAATAGCAGTTCTGTATCTGCAATCAGCAAAAAATTGCTTCAATTGAGAAAGAGGGATACTGTTTACACTAGGTCAAAACATGGGTTTTCACTTTGGAAATCCAGAGTTTTAGGTGTTGGCGGGTGTAGTTTAAAATGGTCTAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAAGCTACACTTGCTGTTGCTGCAGTAGAGAGGAAGAAGAGAGAGCAGAAAAATGCAGTTTGCATCAGTTCTCAGTCAAAGAGAGAGCGTATATTTCGTATTGGCTCAGTTCGTTACAGAATGGATCCCTCCAGGAGGACACTTCAGAGGATTTCAGTCGATGAATCCCAATCCTCTGCATTTACCAGTTCAGGTTTGGCTTCCAAAAGAGCTTACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATGTACGAATTGGTAATGGTAACCAGCTTATCAGAGATCCAAAGAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACCAGATTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCATGATCCCTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTAACGCACCAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCTCAAACAGCAATTGTCCATATAGACATGTCAATGTGAACCCCAATGCTTCTATTTGTGAAGGATTTCTCAGGGGTTATTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTACTTTTGAAGCAACAGGAACCTGTACTGAAGGAGCCAAATGCAAGCTTCATCACCCCAAAAAACAGAGCAAGAGAAAGAAAAGGAAGAGATCTGGAGATCAGAACAACACTAGAGGACGGTATTTTGGTTCTATTCCTGCTGATGTTTCTGAATCTGGGATGATGGTGGCTGCAAAGCGACAGAAACAAAGTAGTGAAATTGAAGAGGAACTTTCTGACTACATCAGCCTTGATGTTGTCAGTGAAGAAGTTGAAGACACTGATGATCCAGCAGCGTTCTGTGAGAATGATTCCTTAGATGATTTTGATGATCTCATTATTAAACCAGTTCTTCTGTTGAAAAGGAAGTTCACATCACAATCATCTGACTCCCACATCCTCCAATCAAGTGGCGGAGACTTGGGTGATTTGTTAATGAGGTAA 5985 0.4274 MDKHHFLHHHHHYHHPQDHRTTRYTSLNPQSHHHHHHNNLPPPPSAPPPPLSYHRTLHTPPPPQPYTPPTPQPQQQQQQQQFSFNHHTTLPHRSLEDDSRSLPYDLLPRHTTAIPWNPNPRTDDFDREFHHHHNRPPPPIETLRYDPGRRDRLVVDHYEQNPREALEWSGGNYHAPSQGDVEPAPYVRVYSVECDADVAGRGSRVESKRWVMSDRERERGRELHESSSNLVNNGSNSDKYYHGSDNVGRYSRGNSRECGHEFARTPPKKQVQKKSALLRIQTVKPNHRNREVEQLRYPGYGPEGNNGFFRGKEQYLAHGKGEEREGSPVEIDISFESNSLVAKAIVAPPSSSVSVPDLNVTPVLDSDLGSGEKSKRVLGSDGYSSGLQQPFRVSSVVVDLNRSPCKGNDRSGLGKEVNMRKNVEDNSSRSRTREADDSRGKNVVPNLVKVDSVCSGKSATRVVKKKKIVKRVVKKATANSKTSVSNSLPAKRLLGTVKVESAALTTSTASVPEKIESNSDEKSNIVGEVAGSERLHSLPKEGNVLKEDKEGGLLQLSLGRDSTSQECKSDKDSDNREVSRFEIERDGNIPNFPSCASSSEDKKSDSHCLDANNNVLNNGNIISVHDNANTSDCLDADNSVPNTDMVTKFLGGSTISEVNHMDYDNKQLGQNEVSSLGKYSNVQSPRNSNLADVGNELLKTSETFSSSRKTRIQDGLDCVQHASALKHTSDNGSSNLEDCISVHCCGIMDDAGKQLTHGDVTINPENCETEKTFPNSNILDESGEGDTKNIKKRKSRTQLNFLSSETESLSPHHVSPVSIANNVDGAPSLLSTDPSASEVLDQSAQNDVDSITGLDGVTALHEKGGVLERQFYPANNSIDDANEVSPTSKRKKVTAKPNFTHCKSEISAVIVVTTTSNAEAPVNFKDNQEPQKEVALSSMGMCIPSSAQSMPYYLEDVSKMSGNILSGGSFDSIDANRETSSEHLELQNSDIVSFLPCEDLASPNDQFSPLEGECKENITPVVLVSNTQTDVLGVGNIMGEKTDLQVIKENHQYRDFVQRSPKADMEPNDLNMKNDLLAQQNRMSYPASGDELTTTSNLNDELMIVDAPAALSDIFSEGMTSEVPDRRILEFTAINDENICGVEENTSSVQQTKQNNRSDRAIGHGNMMTKKTISKPSQVSSKVTTQALNSYRFGLSGTKNQSGSVITKTFQGHSFTLSKSKTKTSASSTHVSKPRTWHRTGNNPPVSLPRINSVGTAPPKRPILERKGNFQNTSYVRKGNSLVRKPTPVPALPQISSVHQSSSPGFDEISKSTKSESRADVADQPMYLRAGATYSQQRQRTPPPPIDTKSEENTSSSHVEPPSGGSCENISDPTTFVEINHNARNSSEDALKHYEIPENQPGPSDNGEGQVEANDRNPFSLNTKRIVYIKPKTNQLVATSNKCDVSVFTDDNGQTALSDGYYKRRKNQLVRTTFESHNQTAIVPNNSTANSDGQGTSNALCNRRFSKKRLHKVARSSCKRSRASLVWTLCSKNSSENDRNSRHYRKVLPQLFPWKRSTFASSFNSSSVSAISKKLLQLRKRDTVYTRSKHGFSLWKSRVLGVGGCSLKWSKSIEKNSKQANEEATLAVAAVERKKREQKNAVCISSQSKRERIFRIGSVRYRMDPSRRTLQRISVDESQSSAFTSSGLASKRAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHQVIPERMPDCSYFLQGLCSNSNCPYRHVNVNPNASICEGFLRGYCADGNECRKKHSYVCPTFEATGTCTEGAKCKLHHPKKQSKRKKRKRSGDQNNTRGRYFGSIPADVSESGMMVAAKRQKQSSEIEEELSDYISLDVVSEEVEDTDDPAAFCENDSLDDFDDLIIKPVLLLKRKFTSQSSDSHILQSSGGDLGDLLMR* 1995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1293 1310 - -
Lapu8g00426 1994 SMART c3hfinal6 1743 1771 IPR000571 GO:0046872
Lapu8g00426 1994 SMART c3hfinal6 1772 1796 IPR000571 GO:0046872
Lapu8g00426 1994 SMART c3hfinal6 1825 1851 IPR000571 GO:0046872
Lapu8g00426 1994 SMART c3hfinal6 1852 1874 IPR000571 GO:0046872
Lapu8g00426 1994 SMART c3hfinal6 1798 1823 IPR000571 GO:0046872
Lapu8g00426 1994 Coils Coil 1621 1641 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 226 242 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 215 242 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1403 1418 - -
Lapu8g00426 1994 Gene3D - 1769 1825 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1330 1373 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 506 606 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1873 1887 - -
Lapu8g00426 1994 ProSiteProfiles Zinc finger C3H1-type profile. 1743 1772 IPR000571 GO:0046872
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1 18 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1 82 - -
Lapu8g00426 1994 ProSiteProfiles Zinc finger C3H1-type profile. 1825 1852 IPR000571 GO:0046872
Lapu8g00426 1994 FunFam zinc finger CCCH domain-containing protein 3 1773 1824 - -
Lapu8g00426 1994 PANTHER CCCH ZINGC FINGER 259 1969 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 113 145 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1395 1418 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1873 1898 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1221 1250 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 1221 1373 - -
Lapu8g00426 1994 FunFam Zinc finger CCCH domain-containing protein 7 1826 1887 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 40 72 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 406 441 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 413 440 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 564 584 - -
Lapu8g00426 1994 MobiDBLite consensus disorder prediction 121 145 - -
Lapu8g00426 1994 ProSiteProfiles Zinc finger C3H1-type profile. 1798 1824 IPR000571 GO:0046872
Lapu8g00426 1994 Gene3D - 1826 1889 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu8g00426 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00426 - - vun:114193719 3140.52