Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00417 ATGCCACAAATTAAAGATTATTACACGGCATATGAATCAGGATTATTTATGTTCGGGCTTATATCATACCTCGTCGTTAGATATGTTGTTGGCATGATATTGTTTATTGTTCTTTTGATATACAAATGGAGGAAAAGACATTCGTCACTGTATGAAAATATCGAAAGTTATTTGGAGCAAAATAACTTGATGCCTATTCGATACACATACAAGGAAATTAAGAAGATGGCTAGTGGTTTCAATGAAAAATTAGGTGAAGGAGGTTATGGCTCTGTATTTAAGGGAAAGTTAAGAAGTGGACCTTGTGTAGCCATAAAAATGTTACGAAAATCAAAAGGTGATGGACAAGATTTTATTAATGAAGTAGCAACTATCGGAAGAATACATCATCAAAATGTGGTGCAGTTAATTGGATATTGTGCTAGTGGTTCAAAACGTGCTCTTGTTTATGAATTCATGCCGAATGGATCTCTTGACAAATTTGTATTTTCCAAAGAAGGAAGTGAACAATTAACTCATAACACAATATATAATATAGCAATTGGAGTAGCACGGGGGATTTCATACCTACATCATGGGTGTGAGATGCAAATTTTGCACTTTGACATCAAACCTCACAACATCCTGCTTGATGAAAAATTCAACCCAAAGGTCTCTGACTTTGGATTGGCAAAACTATATCCAATAGACGAAAGTATTGTGACTATGACAGCAGCAAGAGGGACAATTGGGTACATGGCTCCAGAATTGTTTTATAAAAATATTGGAAGAATATCACATAAGTCTGATGTTTATAGCTTTGGAATGTTGTTGATGGAGATAGCAAGTAAGAGGAAAAACCTAAACCCCCATGCAGAGCGTTCAAGCCAACTTTACTTTCCTTTTTGGATTTATGATCAACTTGGTAAAGAGAAAGATATAGAAATGGAAGATGACATAGACGACGAGAAGAAAATAGCGAAAAAGATGATGATAGTTTCACTTTGGTGTATACAATTGAAACCAAATGATCGTCCTTCCATGAATAAAGTACTCGAAATGCTTGAAGGAGACATTGAAAACCTAAAAATACCTCCAAAACCTTCTCTCTATCCACATGAAACATTGGAAGGTAGTCAAAAAAATTCCCACTTCATTAATTCTTCAAGTTATTCCATGGAGATTGCATGA 1170 0.3496 MPQIKDYYTAYESGLFMFGLISYLVVRYVVGMILFIVLLIYKWRKRHSSLYENIESYLEQNNLMPIRYTYKEIKKMASGFNEKLGEGGYGSVFKGKLRSGPCVAIKMLRKSKGDGQDFINEVATIGRIHHQNVVQLIGYCASGSKRALVYEFMPNGSLDKFVFSKEGSEQLTHNTIYNIAIGVARGISYLHHGCEMQILHFDIKPHNILLDEKFNPKVSDFGLAKLYPIDESIVTMTAARGTIGYMAPELFYKNIGRISHKSDVYSFGMLLMEIASKRKNLNPHAERSSQLYFPFWIYDQLGKEKDIEMEDDIDDEKKIAKKMMIVSLWCIQLKPNDRPSMNKVLEMLEGDIENLKIPPKPSLYPHETLEGSQKNSHFINSSSYSMEIA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00417 389 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Lapu8g00417 389 Gene3D Transferase(Phosphotransferase) domain 1 153 357 - -
Lapu8g00417 389 PANTHER RUST RESISTANCE KINASE LR10-RELATED 51 370 IPR045874 GO:0004672
Lapu8g00417 389 SMART serkin_6 78 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00417 389 SUPERFAMILY Protein kinase-like (PK-like) 62 349 IPR011009 -
Lapu8g00417 389 FunFam PR5-like receptor kinase 153 360 - -
Lapu8g00417 389 FunFam serine/threonine-protein kinase PBS1-like 46 152 - -
Lapu8g00417 389 Pfam Protein kinase domain 81 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00417 389 Gene3D Phosphorylase Kinase; domain 1 52 152 - -
Lapu8g00417 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Lapu8g00417 389 PIRSF TyrPK_CSF1-R 3 166 - -
Lapu8g00417 389 PIRSF TyrPK_CSF1-R 156 386 - -
Lapu8g00417 389 ProSiteProfiles Protein kinase domain profile. 78 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00417 Lapu-Chr8 20040055 20041305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00417 29 382 Receptor kinase-like Gene Family AT4G18250 48.248 1.70e-114 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu8g00417 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00417 - - gmx:100305367 608.986