Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00411 ATGGAAAACCATCTCACGTTATTCCTTCCTCTCCTTGTGTCCCTCTTCATCACCATTCTCATACCTGGTGCTGCTCCTTCATCTTGCCCAGTCAACTTCACCTACGTTCAAACCTTCCCTTGGAACACTTCAACTTGCACAAATCCAACCAACAAACAACCCTGTTGCTTAACCCTCAACACCATCTTCCACATTGGCCTCTCCCAACACCTCAAACAAACCTCTTTTTTTCAACTTCCCAATGAAAACACTTCCTCCATTTGTTTATCAGATTTCCAAGAAAAGCTCACAACCTTGTCAATTCACCCATCTTTGGTCCCTTCTTGCTTCCCTAACCCCTCTCAGTTCGTTACAAACTTTTCCACTTGTGCAGGTGTTGTAACTTCTCGAGATTGGGAACAGAAGGTGGACTCGGTTAGACTTGGCCCGGTACAAACTTTATGCAAAGGAGACCTTGATGACCAAACTAGCTGCAACAACTGCATTGCAGCAAGCTTGAAAGTGGCTCTTCAGCTTACTATTGGTAACCCAAATGCTAGTGAGACGGGTTGTTTTTCGTTCGCATCGCTGTATGCTGCAGCGGTTGTTAATTCAGAAGGCACAACCGATGTGACCACGATTGGTTGCATATTGAGCGTGCCACTTTCTAGTGAAGTGGCAAAAGGGTCTTCAAATAAGAGAGGAAAAGTTGTGAAGGTGGTTTTTACGTTATTGGGCGCTGTTGTTGGTGTTATGATTGTTTTTGTGCTGATGGCGGTTACGTACAGGAAGTTGGACAAGAGAAGGAAGGAAAATGCTCATCATAGAGAAATTGAAAACGGTGTCAGGAACAGTATTTTGACGAACACTGGTGCAAAATGGTTTCACATATCGGAACTTGAACGTGCCACTAATAGATTTTCGCGGAGGAATATGGTTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGAAGCTCCCGGATGGAACTTTGATTGCTGTTAAGGAGAATTTGAATTTGGAAAGTAAAGGGGATGAAGAGTTCTGCTATGAGGTAGATATCATAAGCAAAATAAAGCACAGGAATCTTCTTACTCTTCGGGGTTGTTGCATTTCAAGTGATAGTTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGGCTAATGGCAACCTCAGTTATCAACTGTCGCTTGCTGGAGCTAATAGATTAACATGGCCACAAAGGAAGAATGTAATCCTTGATGTGGCAAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCTCCAGTTTATCATCGTGACATAAAGGCTACCAACATACTTTTGGACTCCCAAATGAATGCTAAATTGGCAGATTTTGGGCTAGCCAAGCAAGGTAGTGAGGATCAGTCTCCTCTCACTACAAGAGTTGCTGGCACATATGGTTATGTGGCACCCGAGTATGCTTTATATGGGAAACTCACTGAGAAGAGTGATGTGTACAGTTTCGGTATTGTGATTCTGGAAATCATGAGTGGAAGAAAAGTGCTTGATTCTTTGAATTCATCTGCAGATGCAATCACGGATTGGGTATGGACACTAGCAGAATCGGGAAAGATGGGGGAAATTTTTGATGAGTCAATAAGAGAAGGACCAAGGAAGATAATGGAAAGGTTTGTTCATGTTGGAATGCTTTGTGCTCATGCAGTGATGGCGTTAAGACCTACTATTGCAGAGGCCCTTAAGATGTTGGAGGGTGACACTGACGTTCCCAAATTACCAGATAGGCCTATGCCTTTGGGTCACGCGTCCTTTCAATCTTCTCTGTTGCATGGTTTGCAAGGAAGTGGAAGATCTATCCAACATGTTTCATCCTATTCATGA 1848 0.4318 MENHLTLFLPLLVSLFITILIPGAAPSSCPVNFTYVQTFPWNTSTCTNPTNKQPCCLTLNTIFHIGLSQHLKQTSFFQLPNENTSSICLSDFQEKLTTLSIHPSLVPSCFPNPSQFVTNFSTCAGVVTSRDWEQKVDSVRLGPVQTLCKGDLDDQTSCNNCIAASLKVALQLTIGNPNASETGCFSFASLYAAAVVNSEGTTDVTTIGCILSVPLSSEVAKGSSNKRGKVVKVVFTLLGAVVGVMIVFVLMAVTYRKLDKRRKENAHHREIENGVRNSILTNTGAKWFHISELERATNRFSRRNMVGQGGDGVVYKGKLPDGTLIAVKENLNLESKGDEEFCYEVDIISKIKHRNLLTLRGCCISSDSLKGKRRFLVYDFMANGNLSYQLSLAGANRLTWPQRKNVILDVAKGLAYLHYEIKPPVYHRDIKATNILLDSQMNAKLADFGLAKQGSEDQSPLTTRVAGTYGYVAPEYALYGKLTEKSDVYSFGIVILEIMSGRKVLDSLNSSADAITDWVWTLAESGKMGEIFDESIREGPRKIMERFVHVGMLCAHAVMALRPTIAEALKMLEGDTDVPKLPDRPMPLGHASFQSSLLHGLQGSGRSIQHVSSYS* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00411 615 Gene3D Transferase(Phosphotransferase) domain 1 381 580 - -
Lapu8g00411 615 SMART serkin_6 300 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00411 615 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 588 - -
Lapu8g00411 615 Pfam SPARK 25 181 IPR043891 -
Lapu8g00411 615 SUPERFAMILY Protein kinase-like (PK-like) 279 573 IPR011009 -
Lapu8g00411 615 Gene3D Phosphorylase Kinase; domain 1 260 380 - -
Lapu8g00411 615 ProSiteProfiles Protein kinase domain profile. 300 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00411 615 FunFam Receptor-like serine/threonine-protein kinase At4g25390 265 380 - -
Lapu8g00411 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Lapu8g00411 615 Pfam Protein kinase domain 302 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00411 615 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 381 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00411 Lapu-Chr8 19823233 19825080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00411 25 602 Receptor kinase-like Gene Family AT1G11050 48.849 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lapu8g00411 Pkinase 4.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00411 - - gmx:100798901 984.171