Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00389 ATGGATAATTTATACAAAGTTGAAGCCACAGGCAATTTGAAGCCTGTGCTGTTAATGATACTGCTCCAGACTCTATATGCAGTGGTGAATATCATGTTAAAGATGGTAGCAGATGATGGAATGAGCTTAAGTATTCTTATTGCCTACCGGTTCATCTTTGCTTCTGCCTTCATTGTTCCCCTTGCTCTCATCTTTGAAAGGAAAAATCTGCAATATGTTACTGGGCAAGTTGTATTCCAAGGTCTTCTCTGTGGGTTATTTGGGGGATCCTTACTACAAGGTCTTTACGTTAAATCGTTGGCATTGACATCTGCAGCATATGTTTCAGCCATGTTGAATCTCATCCCTGTTGTCACCTACCTTATGTCTGTTACTCTCCGACTTGAGAAGTCAAATCTTGGAACAGCAGGTGGGATGGCCAAGTTGGTGGGAACTTTAACAGGAATTGGTGGTGCCATGATCCTCACTTTCTACAAAGGAAGAAAGTTATGCCTCTGGTCAACACATATTGACTTGTTGCACCACGCACCATCACCACATGGTGCCCCCACAGGTTCTCAGGGCTGCATACTAGCCTTTGGAGCCGCTTTGAGCTACTCAGTGTGGTTGATAATCCAGACAAAGATGAGCGAAAAGTATCCGTGGCACTATTCAATTGCGGCTTTAACCTCTTCAACAGCCTCAATCCAATCCGTTATATTTGCTCTTTGTACGGAGAGAGATTGGAGCCAGTGGAAACTTGGTTGGAACTTTAGGCTTGTCACAGCAGCTTCTGCGGGGATCTTGGCCTCTGGAGTAGGTTACACCCTTTTAGCATGGTGTGTGCGCAGGAAGGGACCACTATTTGCGTCTGCTTTTAGTCCTCTAATGCTGGTGATTGTGACCCTTTCCGAGCCATTCGTACTAGATGAGTGTCCCAACATTGGAAGTGTTACAGGATCAGTGTTGGTTGTGGGGGGATTGTACATGTTGTTGTGGGGAAAAAGCAAGGAAACACAGATGAGGCAGAATGAGATCTCCTCAAAAGACTCTGTTCAATGTGAAGCGATCCACATTACCGCCAACCCATCTTTGGCATGCTTCCAAAGGGAGCATGATAAGAAGATTGTAGCAAGTGTTCCTTCCTATACACCATCAACTATCAACCATTCGTAA 1155 0.4485 MDNLYKVEATGNLKPVLLMILLQTLYAVVNIMLKMVADDGMSLSILIAYRFIFASAFIVPLALIFERKNLQYVTGQVVFQGLLCGLFGGSLLQGLYVKSLALTSAAYVSAMLNLIPVVTYLMSVTLRLEKSNLGTAGGMAKLVGTLTGIGGAMILTFYKGRKLCLWSTHIDLLHHAPSPHGAPTGSQGCILAFGAALSYSVWLIIQTKMSEKYPWHYSIAALTSSTASIQSVIFALCTERDWSQWKLGWNFRLVTAASAGILASGVGYTLLAWCVRRKGPLFASAFSPLMLVIVTLSEPFVLDECPNIGSVTGSVLVVGGLYMLLWGKSKETQMRQNEISSKDSVQCEAIHITANPSLACFQREHDKKIVASVPSYTPSTINHS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00389 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Lapu8g00389 384 PANTHER WAT1-RELATED PROTEIN 14 337 IPR030184 GO:0016020|GO:0022857
Lapu8g00389 384 Pfam EamA-like transporter family 14 139 IPR000620 GO:0016020
Lapu8g00389 384 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020
Lapu8g00389 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00389 Lapu-Chr8 19250476 19252673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00389 12 343 Nodulin-like Gene Family AT1G68170 40.233 2.49e-81 251