Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00386 ATGAAGAACTTATGGAAAGTAGTGCAAGACTTAAAGCCTGTACTGCTGATGGTATTGGTTCAAATCACATATTCTTCTGTGAATGTGCTCTATAAGCTGGCCATAAATGATGGAATGAGCATTAGGGTAGTCACTGCCTACCGTCTTATTTGCGCAGTGGTTTTCACTTTTTCTCTTGCTCTCATTTTCGAAAGAAAGAGCAGACCAAAGCTGACATGGAGGGTGCTTTTCATGTCATTTCTAAGTGGTCTATTTGGTGCAAGTTTATTGCATAACCTATTTCTGGAGGCATTGGAATTGGTGTCCGCAACATTTGCTACTGCAATTTATAATCTTGTTCCTGCAGTCACTTTTATTTTAGCTATCTCGTGCGGGTTGGAAAAGTTAAATATGCGAAGCACATCAGGGAAGGCCAAGGTGGTGGGGACGATAATAGGAATTGGCGGGTCAATGTTGCTGACATTTTTCAAAGGGCAAGAAATTAATGTTAAGAGTTTGCACACTGATCTTTTGCATCAAAATAAGCATGTAGTTACTTTGCATACTGACTCTAGTCATAGATTTCTGGGTGCTCTATGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCTAAGATAAATAAAGCATACCCAAGTCCTCACTCAAGCACTGCGTTGATGTCCTTAATGGCTGCAATACAAGCCACAGCCTTTGCCCTTTATGTTGAGAAGGACTGGAGCCAGTGGAAGTTGGGTTCCAGTATCAGGATTCTAACTGTGGTTTATACGGGAATCGTGGCCTCTGGCTTAGTGGTTATTGCCATTGCATGGTGTGTAAAGATGAGAGGTCCTATGTTTGTATCAGTTTTCAACCCTCTCATGCTTCTGCTTGTGGCTGTGGCTGATTGCTTGATGTTAGGTGAAAACTTATATGTAGGAAGTGTGATTGGAGGCGTGCTAATTGTGTGTGGGTTGTACATGTTTCTGTGGGGTAAAAGCAAAGAAATGAAAAAGGTGAATAAGACGGTGTCGTCAGAAATCAACCAGAAAAATGAAGCGACCGAAGTAGTTGTGATGTCCACGACAACAAATACTGAGAATAGTGAGTGCATTAGCAGTAACATAGTTGCGAAGGTTCCTTGA 1137 0.416 MKNLWKVVQDLKPVLLMVLVQITYSSVNVLYKLAINDGMSIRVVTAYRLICAVVFTFSLALIFERKSRPKLTWRVLFMSFLSGLFGASLLHNLFLEALELVSATFATAIYNLVPAVTFILAISCGLEKLNMRSTSGKAKVVGTIIGIGGSMLLTFFKGQEINVKSLHTDLLHQNKHVVTLHTDSSHRFLGALCGFGSCFSFALWLIIQSKINKAYPSPHSSTALMSLMAAIQATAFALYVEKDWSQWKLGSSIRILTVVYTGIVASGLVVIAIAWCVKMRGPMFVSVFNPLMLLLVAVADCLMLGENLYVGSVIGGVLIVCGLYMFLWGKSKEMKKVNKTVSSEINQKNEATEVVVMSTTTNTENSECISSNIVAKVP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00386 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 332 - -
Lapu8g00386 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Lapu8g00386 378 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Lapu8g00386 378 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Lapu8g00386 378 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00386 Lapu-Chr8 19212490 19215550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00386 11 359 Nodulin-like Gene Family AT1G25270 38.857 1.68e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00386 - - gmx:100813812 591.652