Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00384 ATGAATGGAATAGTGAAAGTGGTGCAAGAGTTGAAGCCTCCCTTGCTGATGGTGCTGGTGCAGGTTGCATATGCTGGAAATACTGTGTTTGCAAGCCTCGCCATAAGTGATGGAATGAGCATTAGAGTATTCAGTGCCTACCGTCACACTTTCGGAGCTGCTTTCACATTTTTTCTTGCCATCATTTTCGAAAGAAAGAACAGGCCAAAGTTGACATGGAGGGTGCTGGTGATGACATTTTTTTGTGGATTATTTGGAGGGAGTTTATTCCAAAATCTCTTTTTCACTGCGTTGGCGTTCGTATCAGCAACATATGCTACAGTAATTGTTAATATGATTCCTGTGGTGACTTTCGTCCTCTCCTTCCTCTGCGGGTACGAAAAGTTGAATTTGCGAAGCGCAGCAGGGAAAGCTAAGGTGATGGGAACGATAATCGGAGTTAGCGGGACAATGGTGCTGTCATTTTTCAAAGGGGTTGAAATAAATATTTGGAGGAATATTCACATTAATCTTATGCATAAAAAGAACAATAATCAGGTGGGAGCATCACATGGAAGAGAGTGGATAGGTGTTCTATGTGGTATTGGTTGTTGCTTCAGTTTTTCTGCATGGCTCATCATTCAGACGAAGTTGAGTAAGGAATATCCAAGCCACCACTCAAGTACATTGTTAATGAATTCCATGGCGGCAATACAAGCCACATTTTTTGCTCTCTGTGTTGAGAAAGACTGGAATCAATGGAAGTTGCCTTCGAGTATTATAATTCTATCGACACTCTATTCGGGAATTGCAATCACTACATTTGTGAATATTGTCACTTCATGGTGTGTACAGAAGAGAGGTCCATTGTACGCATCTGTGTTCAACCCCCTTAGCCTTGTGCTCGTGGCTATTATTGCTTCCCTGTTATTACAAGAGAAACTACATCTAGGAAGCATAATAGGTGCAACACTAATTGTGTGCGGTTTGTACATGGTGTTATGGGGTAAAAGCAAAGAAATGAAACCACCAACTGATTTGGTGTCATCGGACAGAGAATTGAGAACGACTGAGGTTGTTGTCATGTCTGCGAACGACAAGAGTGACCAAGGTAGCAATGATTATGAGAATAGTAAGACCAACATTATAACAAATGCTCATAAATGA 1146 0.4136 MNGIVKVVQELKPPLLMVLVQVAYAGNTVFASLAISDGMSIRVFSAYRHTFGAAFTFFLAIIFERKNRPKLTWRVLVMTFFCGLFGGSLFQNLFFTALAFVSATYATVIVNMIPVVTFVLSFLCGYEKLNLRSAAGKAKVMGTIIGVSGTMVLSFFKGVEINIWRNIHINLMHKKNNNQVGASHGREWIGVLCGIGCCFSFSAWLIIQTKLSKEYPSHHSSTLLMNSMAAIQATFFALCVEKDWNQWKLPSSIIILSTLYSGIAITTFVNIVTSWCVQKRGPLYASVFNPLSLVLVAIIASLLLQEKLHLGSIIGATLIVCGLYMVLWGKSKEMKPPTDLVSSDRELRTTEVVVMSANDKSDQGSNDYENSKTNIITNAHK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00384 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 147 - -
Lapu8g00384 381 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Lapu8g00384 381 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020
Lapu8g00384 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
Lapu8g00384 381 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Lapu8g00384 381 MobiDBLite consensus disorder prediction 358 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00384 Lapu-Chr8 19137970 19162007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00384 11 335 Nodulin-like Gene Family AT1G25270 39.692 8.04e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00384 - - vum:124820047 603.208