Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00364 ATGTCTGTGTCCAGTTCTTCTCTCTTCTTCCTTCTCCGCACTTTTCTGACACCCATAGAGCCTCTCACCAACATGGCCGATTCCAAGGTGGAAACAATTGCCCGATTAGCCCAATGGAGAATCGACAACTTTGGACCCTGCTCCTACAAAAAATCCGACCCTTTCAAGCTCGGAATTTGGAACTGGTACATTTCCATAGAGCGGAACAGGTACCTCTACATACACATCTTTCCTGAGCCTTCTAGGCTTTCTAAGGAACAGCCACCTGTGGCTCGCTTCATCCTACGAGTTTCCAACAACTCTGGCCCTACCCGCAAATTTTACATCTCCCCTGTTCATGAAAGGGTGCTTAGGACAAGTGACGACTTTGTGTGGCCTGTTGATACTGCATTCCTTGGTCGCTTTGTTGTTGATATTGAATTTCTTGACCTGAAGGCCTGCCCTGGGAATGGTGGAGTAGCCAAATCTGTATGGCCATCTGATGGAAAACTGCAAACTGTTGCAGCTCAAAGCACTCTTCGATGCCTGTCTCGCATGCTTGACGAGGCTATACATGCTGACCTCACTATCATCACTGCAGATGGTACTCTGAAGGCCCACAAGGCAGTTTTATCTGCATGTTCTACTGTGTTCCATGGCTTGTATGTTCACAATGGTGATGAAGACGATGCATCTACGATCCACATGGAGGATATGTCTCAAGAATCCTGCAAGTCCCTTCTAAGTTACCTATACGGTACTATAAAACAAGAAGATTTCTGGAACCACAGGCTTGCATTGCTTGGAGCAGCCAATAAATATGAGATTGGTGATCTCAAAGATGCCTGTGAGGAAAGCCTACTAGAAGATCTTAACTCGGGAAATGTTCTGGAGAGGCTACATGACGCTTGGCTTTACCAGTTACACAACTTAAAGAAAGGGTGTTTCTCATTCTTATTCGATTTTGGTAAGATATATGATGTTAGAGATGAAATAAATACCTTTTTCCAACATGCTAACAGGGATCTAATGCAGGAGATGTTTCAGGAAGTGCTTACAATTTTGAAATAG 1050 0.4448 MSVSSSSLFFLLRTFLTPIEPLTNMADSKVETIARLAQWRIDNFGPCSYKKSDPFKLGIWNWYISIERNRYLYIHIFPEPSRLSKEQPPVARFILRVSNNSGPTRKFYISPVHERVLRTSDDFVWPVDTAFLGRFVVDIEFLDLKACPGNGGVAKSVWPSDGKLQTVAAQSTLRCLSRMLDEAIHADLTIITADGTLKAHKAVLSACSTVFHGLYVHNGDEDDASTIHMEDMSQESCKSLLSYLYGTIKQEDFWNHRLALLGAANKYEIGDLKDACEESLLEDLNSGNVLERLHDAWLYQLHNLKKGCFSFLFDFGKIYDVRDEINTFFQHANRDLMQEMFQEVLTILK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00364 349 SUPERFAMILY POZ domain 169 282 IPR011333 -
Lapu8g00364 349 Gene3D Potassium Channel Kv1.1; Chain A 160 313 IPR011333 -
Lapu8g00364 349 PANTHER OS08G0495500 PROTEIN-RELATED 25 348 IPR044714 -
Lapu8g00364 349 CDD BTB_POZ_ZBTB_KLHL-like 185 267 - -
Lapu8g00364 349 SMART BTB_4 186 284 IPR000210 GO:0005515
Lapu8g00364 349 ProSiteProfiles BTB domain profile. 186 245 IPR000210 GO:0005515
Lapu8g00364 349 Pfam BTB/POZ domain 179 282 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00364 Lapu-Chr8 18759849 18776886 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lapu8g00364 BTB 1.7e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00364 K10523 - gmx:100775687 590.497