Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00359 ATGGAGCTTGTGAATAACCAACAACAGCAGCAGCAGCAGCAACATTTTCATGTGTTGGTGGTAGATGACAGTGTCATAGATAGGAAGCTTCTGGAGAGGCTCCTAAGAGATTCTTCATGCAAAGCCACCTTCCTGGATTCTGGAGATAAGGCTTTGAAATATCTTGGCCTACTGGACGATGAACTTCAAAATGCTTCCTCAACTTCTGCAGAATCGTTGCAGCAAAACGGAATCAAAGTGAATATGATCATGACAGACTACTGCATGCCAGGAATGAGTGGCTATGATTTACTCAAACGACTGCAGGGATCTTCTTGGAAAGATGTACCAGTCATCATAATGTCATCAGAAAACGTACCATCTAGAATCAGCATGTGCTTAGAAGGAGGGGCAGAGGAGTTTCTTTTGAAGCCTCTTCAGCCATCAGATTTAAAGAAGCTTCAACCATGCTTTCTAAAGTCCTTTGACAATTCTAGTGAACAAGATATATGTGCTGAAAGATCCTTAACTTCTCGTAGTGGCAATAATAACGATACCATTAACAAAACAAATCTGTGTCCAGAGCATGGTTTTAGGTTGCAGTTTGTAACTACAATTGTAACTACAATGTTGAGATTTTGGAAGTCTCTCTAG 633 0.4076 MELVNNQQQQQQQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFLDSGDKALKYLGLLDDELQNASSTSAESLQQNGIKVNMIMTDYCMPGMSGYDLLKRLQGSSWKDVPVIIMSSENVPSRISMCLEGGAEEFLLKPLQPSDLKKLQPCFLKSFDNSSEQDICAERSLTSRSGNNNDTINKTNLCPEHGFRLQFVTTIVTTMLRFWKSL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00359 210 ProSiteProfiles Response regulatory domain profile. 17 152 IPR001789 GO:0000160
Lapu8g00359 210 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 164 IPR045279 GO:0009736
Lapu8g00359 210 Gene3D - 2 153 - -
Lapu8g00359 210 Pfam Response regulator receiver domain 18 146 IPR001789 GO:0000160
Lapu8g00359 210 SUPERFAMILY CheY-like 16 147 IPR011006 -
Lapu8g00359 210 SMART REC_2 16 148 IPR001789 GO:0000160
Lapu8g00359 210 CDD REC_typeA_ARR 18 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00359 Lapu-Chr8 18649984 18652789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00359 11 172 Response Regulator Gene Family AT2G41310 52.727 1.86e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu8g00359 Response_reg 1.9e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00359 K14492 - gmx:100790440 333.569