Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00356 ATGACCAAGATGCTGGGCCTCTTGCTCATGATTGGAGCGATGTTGTTTGGAGTAGGAGCTGAGCCAATGGAAGATAAACAAGCATTGCTTGATTTCCTTCACAACATTAACCACTCTCATAATCTGATCAACTGGGACAAGAGCTCTTCTGTGTGCAAAAGCCGTCTCTCTGCACTTCAAACTGTGAGTCTTGCATCAAATAGCATAACCGGTTCTTTCCCTTCTGGTTTCTCTCAGCTAAAGAATTTGATCTATCTGTATCTCCAATTCAACAAATTTTCTGGTCCATTGCCATCAGACTTTTCTGTATGGAAGAATCTTAGCATTGTTAATTTATCCAACAATTCTTTCAATGGGAGCATCCCATTTTCACTTTCGAATTTGACTCATCTCTCTTCTTTAGTACTAGCCAACAACTCCCTTTCAGGTGACATTCCTGATCTCAATATCCCTACCCTGCGAGAGCTGAATTTTTCCAACAATAACCTTAGTGGGGTTGTACCTGAATCCCTTGAGAGATTTCCGAGTGGAGCATTTTCTGGTAACAATCTTTCTTATTCAGATGCTCTTTCTCCTTCTTTTCTTGTTCAACCCCCAAATCCTCATCCAACAAAGAAAAAATCCAAAGGACTTAGGGAACCAGCATTATTGGGTATCATTATTGGAGCATGTGTGCTGGGAATTGCAGTGATTGCAGCTTTTGTAATTGTGTGCTGCCATGAGAAAGGTGGTAGAAATGGACAACAAGTGAAGTGTCAGAAAGGAGAAGTATCCAGGAAAAAGGAAGGTTCTGAAAGTCGAGACAATAACAGAATTGTTTTCTTTGAGGGTTGCAATCTTGCATTTGACTTGGAAGACTTGTTGAGAGCATCTGCTGAGGTGCTTGGAAAGGGCACGTTTGGGACAGTGTACAAGGCTGCTTTAGAAGACGCAACAACCGTGGCGGTGAAAAGGTTGAAGGATGTCATGGTCGGAAAACGCGAGTTTGAACAACAGATGGAGATGGTGGGGAGGATTAGGCACGATAATGTGGCTGCTTTAAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTGTGTTCAATGTTGCATGGCAAAAGAGGAGGCAGAATTTCTTTAGACTGGGATAGCCGTTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGCCCAACAAGGAGGGAAACTCCTCCATGGAAACATAAAGTCCTCTAACATTTTCCTCAACCCCCAAGGATATGGTTGTCTATCTGACATTGGTCTTGCAACTCTGATGAATCCAGCAACGAGGACAACAGGATACCGTGCACCAGAAGCAACGGACACCCGAAAATCAGTGCCAGCATCTGATGTCTACAGTTTTGGTGTGCTGCTGCTTGAGCTTCTAACTGGGAGGTTTCCCTTACATGCCAAAGGAGGTGAGGAAGTTGTCCACTTGGTTAGATGGGTGAATTCTGTGGTTCGAGAGGAGTGGACTGCAGAAGTGTTTGATGTGGAGTTACTGAGGTTTCCAAATATTGAGGAGGAAATGGTTGAGATGCTGCAAATAGGGATGGCATGTGTTGTCAGAGCACCAGATCAGAGGCCAAAAATTGGTGACGTGGTGAGAATGGTGGAGGAAATTCGTAAAGTAAATACTGAAAATAGATCATCCACTGAATCAAGATCAGAAGGTTCCACTCCAACCCCTCATGCAATTGAAACACCTTCTACCTCTTTTGCGTACTGA 1770 0.4339 MTKMLGLLLMIGAMLFGVGAEPMEDKQALLDFLHNINHSHNLINWDKSSSVCKSRLSALQTVSLASNSITGSFPSGFSQLKNLIYLYLQFNKFSGPLPSDFSVWKNLSIVNLSNNSFNGSIPFSLSNLTHLSSLVLANNSLSGDIPDLNIPTLRELNFSNNNLSGVVPESLERFPSGAFSGNNLSYSDALSPSFLVQPPNPHPTKKKSKGLREPALLGIIIGACVLGIAVIAAFVIVCCHEKGGRNGQQVKCQKGEVSRKKEGSESRDNNRIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVMVGKREFEQQMEMVGRIRHDNVAALRAYYYSKEEKLMVYDYYEQGSVCSMLHGKRGGRISLDWDSRLKIAIGVARGIAHIHAQQGGKLLHGNIKSSNIFLNPQGYGCLSDIGLATLMNPATRTTGYRAPEATDTRKSVPASDVYSFGVLLLELLTGRFPLHAKGGEEVVHLVRWVNSVVREEWTAEVFDVELLRFPNIEEEMVEMLQIGMACVVRAPDQRPKIGDVVRMVEEIRKVNTENRSSTESRSEGSTPTPHAIETPSTSFAY* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00356 589 MobiDBLite consensus disorder prediction 565 589 - -
Lapu8g00356 589 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 364 567 - -
Lapu8g00356 589 FunFam pollen receptor-like kinase 1 258 363 - -
Lapu8g00356 589 PANTHER OS05G0588300 PROTEIN 12 565 - -
Lapu8g00356 589 ProSiteProfiles Protein kinase domain profile. 289 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00356 589 Gene3D Ribonuclease Inhibitor 22 200 IPR032675 -
Lapu8g00356 589 SUPERFAMILY Protein kinase-like (PK-like) 293 552 IPR011009 -
Lapu8g00356 589 SUPERFAMILY L domain-like 36 187 - -
Lapu8g00356 589 Gene3D Phosphorylase Kinase; domain 1 254 363 - -
Lapu8g00356 589 Pfam Leucine Rich Repeat 153 173 IPR001611 GO:0005515
Lapu8g00356 589 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 53 145 - -
Lapu8g00356 589 Pfam Protein kinase domain 292 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00356 589 Gene3D Transferase(Phosphotransferase) domain 1 365 576 - -
Lapu8g00356 589 MobiDBLite consensus disorder prediction 559 589 - -
Lapu8g00356 589 Pfam Leucine rich repeat N-terminal domain 24 52 IPR013210 -
Lapu8g00356 589 ProSitePatterns Protein kinases ATP-binding region signature. 295 326 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00356 Lapu-Chr8 18608555 18611157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00356 14 580 Receptor kinase-like Gene Family AT4G23740 53.748 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu8g00356 Pkinase 5.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00356 - - gmx:100810095 971.459