Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00348 ATGGGAGATTGGGATTACAACAGCCTCGTGCACGAGCTACGACAAGGAATGGAACAGGTAAGGCAGCTTCAAATCTCTCTACACGTGCCTTGTTCATCCCAGGAAAGGTATGAGGTTCTTGTCCAGAATATCATAGTTTCGATTGAAAGGGCACTTACAATGGTGAACACAAAAAAGAGGCTAGTGGGGAATCCTTCTTCTCAAGTATTGCGCTCATTGAATGCAATGCGGAAGTCACAGTCACCACCTTTTAGCGGAAGTCCTCACAGTGAAAACTTAGACCGAGATCTGAGGGAAATCAGCAGAAGTTCGCCCAAAAACAGGAGGGCTATACCAAGCTGGACTAAATACATTCGAGTTAACCCGGGGACGAGAGTAGAAGAGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGGCATACATGGAGCCAAGTATCCAAGAGGCTATTATGGATGCGCCAAAAGACATGTTAAAGGCTGCATGGCCACAAAGCAAGTGCAAAGATCTGATCCAGACCCAACTGTCTTTGAAATCAATTACCGAGGAAAGCACACCTGCACAGTGGCTTCCTCTGCGGTTCTTCCATTTGATTCCGCAGAAAACCAAGAACCAAATTTGAGCACAAATCCAAAGCAGCAACCGAGTGATCTACTTATGAACCTCCGTGCAGGGCTGAGAGTCATGACCGAGAACCTAGACCAACCATCAGTTGCTTCATCATTCCACTATTTCCCTTCAACTTCAACTGCGAAAGAGCAAGTTTTCCCTTCCACAATGATCGAAAACAACTTCACGGGAAATCTCGCTTGCCCTTCCTATGTCCCTGCCACATCTGACACAACCTACCTTTCGGTTTCTCCATGTGGTGGAAACAAATTTAGAGGGAACCCAAATTTGGCAAGTTCTGGACCTGAGATCAATGACATGATTTCCCCAGTTACATCTGCTGCTAACTCTACAACCATTGCAAGCTTGGACTTCCCTTTTGATCAGTTTCAAATACTACGCCAAAACTTCACCTTTCATAACCCACCCTTCCCCTGA 1056 0.4564 MGDWDYNSLVHELRQGMEQVRQLQISLHVPCSSQERYEVLVQNIIVSIERALTMVNTKKRLVGNPSSQVLRSLNAMRKSQSPPFSGSPHSENLDRDLREISRSSPKNRRAIPSWTKYIRVNPGTRVEEPLDDGYSWRKYGQKGIHGAKYPRGYYGCAKRHVKGCMATKQVQRSDPDPTVFEINYRGKHTCTVASSAVLPFDSAENQEPNLSTNPKQQPSDLLMNLRAGLRVMTENLDQPSVASSFHYFPSTSTAKEQVFPSTMIENNFTGNLACPSYVPATSDTTYLSVSPCGGNKFRGNPNLASSGPEINDMISPVTSAANSTTIASLDFPFDQFQILRQNFTFHNPPFP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00348 351 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00348 351 MobiDBLite consensus disorder prediction 91 105 - -
Lapu8g00348 351 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 256 IPR044810 GO:0003700
Lapu8g00348 351 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g00348 351 MobiDBLite consensus disorder prediction 76 107 - -
Lapu8g00348 351 SUPERFAMILY WRKY DNA-binding domain 128 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g00348 351 Gene3D WRKY domain 119 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g00348 351 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00348 Lapu-Chr8 18407629 18409093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00348 1 245 WRKY Transcription Factor Family AT4G23810 36.059 6.64e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu8g00348 WRKY 9.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00348 - - ccaj:109795434 434.491