Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00342 ATGCTTGGGAAACGTACAAGAGTTGGGGAGCATGAAGCCATGAGGAAAATAAAGAATGAATTTATGAGCCATTGGGATGAACTTTTGACAAAGCAAGGGGAGAGAATCCTTCTTGCTGCAGCCAATTGGCCATTTGATCTCGATGAAACTATTATTAGGCGATTTGAAAGAAGAATCATGGTAGGACTGCAGTTTGTTGAAAACAAGGAAAAGATTTTGAGGACTCTTTTAGCAAAACAGAAGGTGGACAACGAACTTGATTTTAAAGAACTTGCAACTATGACAAAAGGATATACTGGAAGTGATCTTAAGGTTTTTACTACTCTTTGA 330 0.3788 MLGKRTRVGEHEAMRKIKNEFMSHWDELLTKQGERILLAAANWPFDLDETIIRRFERRIMVGLQFVENKEKILRTLLAKQKVDNELDFKELATMTKGYTGSDLKVFTTL* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00342 109 Pfam ATPase family associated with various cellular activities (AAA) 5 62 IPR003959 GO:0005524|GO:0016887
Lapu8g00342 109 Gene3D - 6 63 IPR027417 -
Lapu8g00342 109 Gene3D - 64 105 - -
Lapu8g00342 109 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 104 - -
Lapu8g00342 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 104 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00342 Lapu-Chr8 18279794 18280379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00342 16 105 Calmodulin-binding Proteins AT3G56690 32.609 1.06e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00342 - - gmx:100807464 179.489