Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00335 ATGATTTTGAGTGGACCAACAGTGGTTGTGAAGAGGTTTAGGCACATGAACAATGTTGGGAAACAGGAGTTCATTGAGCACATGCAAAGGCTTGGAAGTTTAGCACACCCTAATCTTCTTCCTCTTGCAGCATTCTACTACAGAAAAGAAGATAAGTTCTTGATTTATGACTTCGCTGAAAATGGAAGCTTGGCCAGTCATCTACATGGCAGAAATGGCTCTGCTCTAACCTGGTCCACCCGTTTAAAGATCATAAAAGGGGTGTCTAGGGGCTTAGCCTACCTCTATGAAAACTTCCCCGGGGAGAACCTACCTCATGGTCATCTCAAGTCCTCTAACGTGGTGCTGGATCATTCATTTGAGCCACAGTTGACTGAGTATGGCCTTGTGGAAGTGATGAGTAAGAGCCATGCTCAGAAGTTCATGGCAGCCTACAAGGCCCCAGAAATGAGCAAATTTGGTAGGCCGAATGTGAAAAGTGATGTGTGGTGTCTGGGGATCCTCATTCTGGAGCTGCTGACAGGGAAATTTCCAGCAAATAATCTGAGACATGGGAAGGGTGGGAACAATGCTGACTTGGCAACATGGGTAGATTCAGTTGTGAGGGAAGAGTGGACTGGTGAGGTGTTTGATAAGGACATTTTGGGGACTAGGAATGGGGAGGGTGAGATGCTGAAGCTGCTGAGGATTGGAATGTTTTGCTGCAAGTGGAGTGTGGAGAATAGATGGGATTGGAGGGAAGCAGTGGCCAAGATTGAGGAGGTAAAGGAGAATGATGGTGAGGATGATTATTCTTCTTATGTCAGTGAAGGGAATTTGAATTCATGGACTGTAAGTGAAGATGAGTTCTCTTTCTCTGTCACTAATTGA 870 0.4563 MILSGPTVVVKRFRHMNNVGKQEFIEHMQRLGSLAHPNLLPLAAFYYRKEDKFLIYDFAENGSLASHLHGRNGSALTWSTRLKIIKGVSRGLAYLYENFPGENLPHGHLKSSNVVLDHSFEPQLTEYGLVEVMSKSHAQKFMAAYKAPEMSKFGRPNVKSDVWCLGILILELLTGKFPANNLRHGKGGNNADLATWVDSVVREEWTGEVFDKDILGTRNGEGEMLKLLRIGMFCCKWSVENRWDWREAVAKIEEVKENDGEDDYSSYVSEGNLNSWTVSEDEFSFSVTN* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00335 289 Gene3D Transferase(Phosphotransferase) domain 1 59 274 - -
Lapu8g00335 289 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Lapu8g00335 289 SUPERFAMILY Protein kinase-like (PK-like) 5 254 IPR011009 -
Lapu8g00335 289 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00335 289 Pfam Protein tyrosine and serine/threonine kinase 7 183 IPR001245 GO:0004672|GO:0006468
Lapu8g00335 289 FunFam Pollen receptor-like kinase 1 59 266 - -
Lapu8g00335 289 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 261 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00335 Lapu-Chr8 18113363 18118214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00335 4 285 Receptor kinase-like Gene Family AT4G31250 55.517 1.81e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu8g00335 PK_Tyr_Ser-Thr 6.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00335 - - gmx:100781593 536.184