Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00333 ATGGCACTGGAAGTGCTTGAAGCGCTTGATTCAGCGCGAACCCAATGGTACCACGTGACGGCCATAGTGATCGCAGGCATGGGGTTCTTCACCGACGCCTACGACCTTTTCTGCATCTCCACGGTTTCCAAACTTCTGGGACGCTTGTACTACTTCGACCCTAGCTCCGCCAAGCCGGGGAAGCTCCCAACCTCAGTCAACAACCTCGTTATCGGAGTCGCCCTCGTCGGAACACTCTTCGGCCAGCTAGTCTTCGGCTGGCTTGGCGACAAACTCGGACGCAAAAAGGTCTACGGAATCACCCTCATCCTCATGGTTCTCTGCGCCATCGCCTCCGGTCTCTCCTTCGGCGCCACCGCGAAATCCGTAATGGGAACGCTCTGTTTCTTCCGCTTCTGGCTCGGCTTCGGTATCGGCGGCGACTACCCCCTCTCCGCCACCATTATGTCGGAGTACGCCAACAAGAGGACACGTGGCGCATTTATAGCCGCCGTGTTCGCCATGCAGGGCGTGGGAATCATCTTCGCGGGGCTTGTCTCCATGACACTCTCCGGGCTTTTCAAATCATATTACCCTGCTCCGACGTATTCTCAAAGCCGCGTCTTGTCCACGCAACCGGAGGGTGATCTTCTATGGCGTTTGGTTCTCATGATCGGTGCTATTCCGGCGATGTTGACCTACTACTGGCGAATGAAGATGCCAGAAACGGGGCGTTACACTGCCATCGTAGAAGGTAACGCGAAACAAGCTGCTGCGGATATGGCGAAAGTTTTGGACATCGAAATCCAGGCAGAGCAGGAAAAATTGGCTGAGTTCAACGCAGCAAATAACTACCCTTTGTGGTCGAACGAGTTCTTTCAGCGTCATGGGCGTCATTTGATCGGAACCATGAGCTCGTGGTTTCTTCTTGACATCGCGTTTTACAGCCAGAATCTAACGCAGAAGGATATTTTCCCTGCCATTGGACTCATAGACAAAGAGTACGACATGAATGCCATCAATGAAGTGTTCGAGACGTCACGTGCCATGTTCGTGATCGCTCTGCTTGGGACCTTCCCCGGTTACTGGTTCACTGTTTTCTTCATCGAGAAGCTGGGGCGCTACAAGATCCAACTCGTGGGCTTCTTCATGATGTCGTTCTTCATGTTTGTGATCGGTGTGAAGTACGATTACCTCAAGAACGAGAGCAAGGGCGCCTTCGCTCTTCTCTATGGGCTGACGTTCTTCTTCGCAAACTTCGGACCCAACAGTACCACCTTCGTGCTTCCGGCGGAGCTGTTTCCGACACGCGTGAGGAGCACGTGCCACGCGCTGAGTGCGGCAGCGGGGAAGGCCGGGGCTCTGGTGGGGGCGTTCGGGATACAAAGCTTGACGGTGGGTGGTGAAACGTACAAGATTAAGAAGGCGATGATTATTTTGTCAGTGACTAACCTGTTAGGGTTCTTCTGCTCGTTCTTGGTTACTGAGACTAAGGGAAGATCGTTGGAGGAGATTTCCGGTGAGGATGGGAGAGAGAGTGAACTCACGCCAACGCCCAACAATAACAGCAGGGTTCAGGTATCAAGGACTGAGACCATGTGA 1581 0.5357 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSSAKPGKLPTSVNNLVIGVALVGTLFGQLVFGWLGDKLGRKKVYGITLILMVLCAIASGLSFGATAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMTLSGLFKSYYPAPTYSQSRVLSTQPEGDLLWRLVLMIGAIPAMLTYYWRMKMPETGRYTAIVEGNAKQAAADMAKVLDIEIQAEQEKLAEFNAANNYPLWSNEFFQRHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAIGLIDKEYDMNAINEVFETSRAMFVIALLGTFPGYWFTVFFIEKLGRYKIQLVGFFMMSFFMFVIGVKYDYLKNESKGAFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGAFGIQSLTVGGETYKIKKAMIILSVTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTPTPNNNSRVQVSRTETM* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00333 526 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
Lapu8g00333 526 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
Lapu8g00333 526 MobiDBLite consensus disorder prediction 496 526 - -
Lapu8g00333 526 MobiDBLite consensus disorder prediction 506 526 - -
Lapu8g00333 526 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 18 496 - -
Lapu8g00333 526 Coils Coil 255 275 - -
Lapu8g00333 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
Lapu8g00333 526 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu8g00333 526 CDD MFS_PhT 22 491 - -
Lapu8g00333 526 FunFam Inorganic phosphate transporter 1-6 17 512 - -
Lapu8g00333 526 NCBIfam phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00333 Lapu-Chr8 18066045 18067625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00333 3 501 Inorganic Solute Cotransporters AT5G43350 63.796 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00333 K08176 - gmx:100805284 953.74