Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00322 ATGGTATGCAGGAGTTGTGTAAGGTCTTTGGTTGTTCATGCTGGAACCTTCGTCAACCGAGTGAGAATCAACGGATTTGGGAGGAGTTTGGTTGTAGTTCCCGGTTATTGTCCGATCCGTGAGTACAAGAGAATCACAGGGATGATGGTTGATACGGGTTCTATGTCAAGGGCTGGACCCCTTGCTGATATGGTGCCTGAGAAAGATGATGATGGTAGATTTGCCAGTGGAGGGTGGAAAAGTGAAGATGGAAGGCTTAGCTGTGGGTATTCAAGTTTTAGGGGGAAGAGAGTGACAATGGAAGATTTTTATGATATTAAGACATTGAAGATCGGTGGCCAATCAATATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCCCGTGCTGCGGAGTATTTGAAGGAACATCTCTTTGACAATCTCTTGAAGCATCCACAATTTTTGACAGATGCCAAATTGGCTATAAGTGAAACATATAAGCAGACTGACACTAATTTTCTGGATTCCGAAAAGGACACCTTCAGGGATGATGGATCTACAGCTTCGACAGCAGTCTTGGTTGATAACCATCTTTATGTAGCTAATGTTGGAGATTCTAGGACCATAATATCTAAAGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAATAGAAGTGATGAGCGGAAGAGAATTGAGAATGCCGGCGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGGGTGCTAGCAATGTCTCGGGCCTTTGGTAACCGTATGTTGAAGCAGTTTGTTGTAGCAGAACCTGAGATCCAGGACCAGCAGATAGATGAACAAATTGAACTGCTTATTCTTGCAAGTGATGGACTCTGGGATGTAGTACAGAATGATGATGCTGTTTCTCTTGTCCGCACAGAAGAGGAGCCTGAGGCAGCTGCTCGCAAGTTAACAGAAGCAGCATTTTCCCGTGGGAGTGCTGATAACATTACATGCATTGTGGTGCGCTTCCATCATGACAAAAAAGACGTAGCGAAACCTGACATAGCAGAATCAGCTAGTGCTCAGCATGAGTAG 1065 0.4469 MVCRSCVRSLVVHAGTFVNRVRINGFGRSLVVVPGYCPIREYKRITGMMVDTGSMSRAGPLADMVPEKDDDGRFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGQSICLFGIFDGHGGSRAAEYLKEHLFDNLLKHPQFLTDAKLAISETYKQTDTNFLDSEKDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQQIDEQIELLILASDGLWDVVQNDDAVSLVRTEEEPEAAARKLTEAAFSRGSADNITCIVVRFHHDKKDVAKPDIAESASAQHE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00322 354 FunFam Probable protein phosphatase 2C 76 79 339 - -
Lapu8g00322 354 CDD PP2Cc 87 333 IPR001932 -
Lapu8g00322 354 SMART PP2C_SIG_2 85 333 IPR001932 -
Lapu8g00322 354 SUPERFAMILY PP2C-like 83 335 IPR036457 -
Lapu8g00322 354 PANTHER PROTEIN PHOSPHATASE 76 333 IPR015655 GO:0004722|GO:0006470
Lapu8g00322 354 SMART PP2C_4 77 331 IPR001932 -
Lapu8g00322 354 Pfam Protein phosphatase 2C 89 326 IPR001932 -
Lapu8g00322 354 ProSiteProfiles PPM-type phosphatase domain profile. 87 333 IPR001932 -
Lapu8g00322 354 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Lapu8g00322 354 Gene3D - 78 353 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00322 Lapu-Chr8 17608735 17617486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00322 1 354 PP2C-type Phosphatase Gene Family AT5G53140 68.207 2.11e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00322 K17506 - gmx:100805795 644.425