Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00286 ATGGCGGCGGCGGAGGCCCTCACTACCGGCACCGAGAGCCACCACCTGGCTCGAGCGATATTGGTTCGGCTCAACGAGTTGGTGTCCACCACCCACGGCACCAACATCGAAAGACTTGCCGCGCACTTTAGCAGCGCACTCCAATACCTGCTAGACGGCGCCGCGAGTGCGCACACCATAACCACCGACACCCCCAACCTCACGGACACGCTAACCGCGTTCCACCTTCTCCAGGACATGTCCCCTTACGTCAAGTTCGCTCACTTCACCGCCAACCAGGCCATTTTAGAAGCCGTGGCCCACGAAAAACGGGTCCACATCGTCGACTTCGACGTCACCGAAGGGGCTCAATGGGCCTCCCTAATCCAGTCCCTCTCGTCAAGAAGTACCGGCCCACCAGGCCCACACCTCCGCATCACCGCATTGTCCAGAGGCTCCGCCTCTGGACGAAAATCCATCGCCACCGTTCAGGAAACCGGACGGAGGCTAACGGCGTTCGCGGCTTCCGTGGGGCAACCGTTTTCTTTTCATCAGTGTCGATTGGAACCTGACGAAACGTTTCGACCTTCGTCACTGAAACTTATTCGCGGCGAGGCCTTGGTGTTTAACTGCATGCTGCACTTGCCGCACCTGAGCTTCCGAGCCTCAGGCTCGGTTGCTTCGTTTTTAAAAGGGGCGAAGGAGTTGAACCCGAGGGTGGTGATGGTGGTAGAGGAAGAGGTGGCGCGTGGTGGAGATGCGGGCTTTGTTGGCCTGTTTATGGATTCGCTGCAGCACTACTCGGCGGTGTTTGATTCGCTGGAGGTTGGGTTTCCCATGCAGAGATGGGCCCGGGCTTTGGTGGAGCGCGTGTTCTTGGGCCCAAGAATAGCAAATTCTCTGGGGCGGATGTACCGGAGTGAAGGAGAGGAGAGAGGGTCGTGGGAGGAGTGGTTGGGTGCGGCGGGGTTCAGGGGTGTTCCCGTAAGCTTCGCTAATCATTGCCAAGCGAATCTGTTACTGGGATTGTTTAACGATGGGTATAGAGTGGAGGAGTTGGGGAACAATAGATTGGTCTTGGGTTGGAAATCACGCCGTCTGATTTCAGCCTCGGTTTGGACTCCAAACTCTTGA 1113 0.575 MAAAEALTTGTESHHLARAILVRLNELVSTTHGTNIERLAAHFSSALQYLLDGAASAHTITTDTPNLTDTLTAFHLLQDMSPYVKFAHFTANQAILEAVAHEKRVHIVDFDVTEGAQWASLIQSLSSRSTGPPGPHLRITALSRGSASGRKSIATVQETGRRLTAFAASVGQPFSFHQCRLEPDETFRPSSLKLIRGEALVFNCMLHLPHLSFRASGSVASFLKGAKELNPRVVMVVEEEVARGGDAGFVGLFMDSLQHYSAVFDSLEVGFPMQRWARALVERVFLGPRIANSLGRMYRSEGEERGSWEEWLGAAGFRGVPVSFANHCQANLLLGLFNDGYRVEELGNNRLVLGWKSRRLISASVWTPNS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00286 370 Pfam GRAS domain family 2 367 IPR005202 -
Lapu8g00286 370 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 363 IPR005202 -
Lapu8g00286 370 ProSiteProfiles GRAS family profile. 1 367 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00286 Lapu-Chr8 15975510 15976877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00286 17 370 GRAS Transcription Factor Family AT3G54220 37.637 6.87e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu8g00286 GRAS 6.4e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00286 - - pvu:PHAVU_008G165200g 675.241