Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00284 ATGGTTAAGCCAGAGAACAAGATCCACACAGAATCATCAAAGCCATTGAGAGCAGTATCTTCCTCATCACCAGCATCAAGTGACAACAAGAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTGTCTGAGATTAGAGCACCAAACCAAAAGACTAGAATATGGTTGGGATCTTATTCAACTGCTGAGGCAGCAGCAAGAGCCTATGATGCTGCACTACTTTGCCTTAAGGGCTCCTCAGCCAATCTCAACTTCCCTTCAAGCTCCTCACTCTACATTCCTCAAGACACTGTCATGTCCCCAAAATCAATCCAAAGAGTGGCTGCAGCTGCTGCTAACAACTTTTTGGACAATGCTATTGCTACCACCCCATCTTCTCCACCTTCTCCTCCTCTTGCTTCAACCTCCTCCTCTTCATTGGTCTCATCCCCATCAATGTCATCATCTCCCTCAGACCACCAAACTGATGATGATGTCTCACTTCTGTCACCATTTGGGGCCTACACTCCTCCTCCCCCTACTATTATCTCTGATCATGCAAGTGAATCAATGGCTATGATGGAATCTTGGTATGGCTTGGAGGAGTTACAATCCCCAAAATATGTTGAGCAAATGCTAAGTGGGGCATTCTTTGACATTGATTCGACACAGTTGCTTGATGATCTGTATGAAGAAAGTGACATCCGTTTGTGGAGTTTCTGCTGA 714 0.4566 MVKPENKIHTESSKPLRAVSSSSPASSDNKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSLYIPQDTVMSPKSIQRVAAAAANNFLDNAIATTPSSPPSPPLASTSSSSLVSSPSMSSSPSDHQTDDDVSLLSPFGAYTPPPPTIISDHASESMAMMESWYGLEELQSPKYVEQMLSGAFFDIDSTQLLDDLYEESDIRLWSFC* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00284 237 MobiDBLite consensus disorder prediction 13 29 - -
Lapu8g00284 237 MobiDBLite consensus disorder prediction 124 167 - -
Lapu8g00284 237 MobiDBLite consensus disorder prediction 1 34 - -
Lapu8g00284 237 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Lapu8g00284 237 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 180 - -
Lapu8g00284 237 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
Lapu8g00284 237 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Lapu8g00284 237 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
Lapu8g00284 237 CDD AP2 31 91 IPR001471 GO:0003700|GO:0006355
Lapu8g00284 237 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Lapu8g00284 237 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Lapu8g00284 237 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Lapu8g00284 237 MobiDBLite consensus disorder prediction 135 161 - -
Lapu8g00284 237 FunFam ethylene-responsive transcription factor ERF014-like 31 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00284 Lapu-Chr8 15921449 15922162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00284 1 236 AP2-EREBP Transcription Factor Family AT1G21910 46.591 4.70e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu8g00284 AP2 5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00284 - - gmx:100813313 304.293