Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00279 ATGCAGGCACAATTTCTAACACTTGTTCATCATAGAAATGTGGTTTCTCTTGTGGGGTATTGTGATGAAGGCGATGCTAAAGCACTTATTTATGAATATCTTTCAAAAGGAAACCTCCAAGAACAATTGTCAGAAGCTTCTTTTGTAGATAAAAGTTGGAGTGTCTTGGGATGGAAAGAGAGAGTTCAAATTGCCTTAGATGCAGCAAGTGGATTGGATTATCTGCATAATGGATGCAAGCCACCTATAATTCATAGAGATTTGAAAGGTTCCAACATCTTACTTGATGAAAATATGCATGCCAAGATTTCAGACTTTGGATTGTCCAGAACTTTTGCAAATGACAATGACACTCATATCTTAACTAATTACCCAGCTGGCACACCAGGTTACCTTGATCCTGAGTATCACTCCTCGGGGACTCTAAATAAAAGAAGTGATGTTTACAGTTTTGGGGTAATTTTGTTGGAGCTAATTACAGGTCAACCTGCAATAAGAGGAACTCCTGAGAAACCTAGTCACATACATTCTTGGGTTAAACTCAAACTTGAAGCTGGAGATATCCAAGCAATAGTTGATCCAAGATTAGAAGGAAATTACAACGTTGCTTCAGCTTGGAAATTTTTGGATATAGCCATGTCTTGTCTTCCTGATGTTGCCATCCAAAGGCCTGACATAAGCCACATAACCTCAGAACTTAAGGACTGTTTGTCTTTGGAAGTATCCCTTCAAGGGACTGTGACCAACAACGTAGATTCATTCCTCATGGATTCTATGCTCATTGATTTCAATGAATCTGATATAGGTCCAAATCCTAGGTAG 822 0.3881 MQAQFLTLVHHRNVVSLVGYCDEGDAKALIYEYLSKGNLQEQLSEASFVDKSWSVLGWKERVQIALDAASGLDYLHNGCKPPIIHRDLKGSNILLDENMHAKISDFGLSRTFANDNDTHILTNYPAGTPGYLDPEYHSSGTLNKRSDVYSFGVILLELITGQPAIRGTPEKPSHIHSWVKLKLEAGDIQAIVDPRLEGNYNVASAWKFLDIAMSCLPDVAIQRPDISHITSELKDCLSLEVSLQGTVTNNVDSFLMDSMLIDFNESDIGPNPR* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00279 273 Gene3D Transferase(Phosphotransferase) domain 1 35 254 - -
Lapu8g00279 273 Pfam Protein tyrosine and serine/threonine kinase 3 168 IPR001245 GO:0004672|GO:0006468
Lapu8g00279 273 SUPERFAMILY Protein kinase-like (PK-like) 3 232 IPR011009 -
Lapu8g00279 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Lapu8g00279 273 SMART serkin_6 3 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00279 273 PANTHER OS07G0107800 PROTEIN-RELATED 2 237 - -
Lapu8g00279 273 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 34 245 - -
Lapu8g00279 273 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g00279 273 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00279 Lapu-Chr8 15741050 15745670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00279 2 241 Receptor kinase-like Gene Family AT1G51890 50.417 5.14e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu8g00279 PK_Tyr_Ser-Thr 3.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00279 - - pvu:PHAVU_008G164500g 513.457