LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu8g00278	ATGGAGAGAGAATTACAATGGATTCTAGTTTTAGCAGTTTGTGCTTCATCACTCATTAATATACTTGCTGAGAACACTGAACTAGCTTACCGGAACCTTGCCAATCTTGATTATTCAGGTGTTATAAGCATTGATTGTGGGGTAAATGAGGGCTACACTGACAAGACAACCAACTTGCAGTATGAAGCAGATGATATCCAATTTGGTGAAATCTATAACACATCCTCAATTTACAACTTCAACCATGTGAGTCAAATTCATAAGCAGTTGAACACGTTGAGAAGTTTCCCTAATGGGAAGAGAAATTGCTATAGCTTGACACCCAAACTGGGAAAGAACAACAAATACATAATCAGGGCTTACTTTGCATATGGAAACTATGACAACAAACATAAACCACCAGTTTTTGATTTGCATCTTGGAGTCAATTTCTTCAGGACAATAAACTCTTCTGAGTCTGTCGTTATTCGAATCGAAGCTATTTATTTTGCCTCAACTGAAACAATCGATTTATGCCTTGTCAACATTGATCAAGGGGTGCCCTTCATTTCATTGTTGGAACTATGGCCTTTGGACAATTCCATTTATCAAAGTTCCACCACTTTGTTAACACTAGATCTCCTCACACGAGTTAACCTTGGTGCCTCTGATGATAACTTCATCAGGTACACAGATGATATATATGGAAGGTCATGGGAAGTTCCAAACAATTATAACAAGAAGGAATTGAACACATCATCAGCTATTGATTTGGACAAACTTGTTGATCCTTACAAACTGCCAGCAGAAGTTTTGAGTTCTGCAGTGGAGCCATTAAATTCCGATTCTCTGGAATTCACACTCAATTATAGCATGGATTCTGAATACTATGCTTATCTTCATTTTTTTGACTTTGAGGATCGGACAAATAAACAAAAACGAAGATTGAAAATAGTTACTTTTAATGGTTTTGGTGATGATAATGTGACACAATTTACTCTGTCATACTGGAAGCCCAATAGCATAATTCTACATATAAAACCAGGGATGGGTATTTGGAAGATATTGATTGAAGCCAAGCCTGATTCTGAGTTACCTGCTATGCTTAATGCTCTTGAGATTTATAGAGTAGTACCGCAGTTATATTCTTCCACACAACAAGAAGATGTTGATGCTATCTGTCACATCAAAGATGTTTATATGATCCATGAAATGAATTGGCAAGGAGACCCCTGTGGACCAAAGAATTTTACATGGGAAGGTGTGAAATGCAGCAATGGGGACTCTCCAAGAATCATTTCATTAAACTTGAGCTCGAGCAAGTTGTCAGGAGAGATAGATGCCTCATTCTTTAACCTCACACGTTTGGAGACTTTGGATTTGTCAAACAATGAATTGACAGGGGAGGTGCCTGAATCTTTTGCAAAACTGCCACAATTGCAGTTCCTAAACTTGTCCAGGAATATGCTCACAGGTTCAATTCCTGAGAGTCTAAAGGAGAAGTCATCTAACAACTCTTTGCAATTGAGTTTGGATGGAAATACCTGTTCCTATCAGACTGGGCCAAGCAAGAGAAACCACAAGAAGTTTATTATTCCATTAGTTGCATCTATAACAGCATTTGTTGTAGTGGTCCTCATAATGTCTACCATAGTTATGGTGATCTGGAGACTTAGAAAAAAGGGAAAAGTGATTTCTTCAATTTCTGTCAAAGATGAGCTACTGAAATCAACGAATCAAGTATTTTCCTACTCCGAGATTCTTAGAATCACTAATAATTTCACAACAATGATTGGGAAAGGTGGATTTGGTAAGGTTTACCTAGGTACTTTAGAGTGTGGAAAAAGAGTTGCTGTGAAGATACTTTCTTCACCATCAGCACAAGGGTATAAGGAATTTCAATCGGAGGCAAAACTATTGATGCAAGTTCATCATAGAAACGTGGTTTCTCTTGTGGGATACTGTGACGAAGGTGACACTAAAGCACTTATTTATGAATATCTACCTGAAGGGAATCTCCAACAAAAATTATCAGATAAAAACCCTTTTTTTTTGGAATGGACGCAAAGACTTAAAATTGCTATGGATGCAGCAAATGGGTTGGACTATTTGCATAATGGGTGCAAGCCACCAGTAATTCACAGAGATTTAAAAACATCCAACATCTTGTTAGACGAAAATATGCATGCCAAGATTTCAGACTTTGGAGTGTCTAAAACTTTTGCCAATGACACTGACACTTATGTCACAACTTATCCAGCAGGCACACCAGGTTACCTTGATCCTGAATTTTATTGCTCTGGGACTCTGAACAAAAAGAGTGATGTTTATAGTTTTGGGATAATCCTACTAGAGTTAATCACTGGTCAACCAGCGCTGAGAGGAACACCAGAAAATCTGAGTTACATACTTCCTTGGGTTAACAATAAACTGAGAACAGGAAATATCCAAGAAATAGTTGATCCAAGGTTACATGGAAAATACAATGGCGCTTCAGCATGGAAATTTATAGGGATAGCCATGTCATGTCTCCCTCAAGTTCCAATTCACAGGCCTGACATAGGGCACATAGCCTTAGAACTAAAGGACTGTTTGGCTCTTGAATTATCACTTGAAAGAACTGTGAGCAACATAAGAGATTCATTGCTCACCAGTTCTAGGCAAATTGAATTCCTTTAA	2658	0.3796	MERELQWILVLAVCASSLINILAENTELAYRNLANLDYSGVISIDCGVNEGYTDKTTNLQYEADDIQFGEIYNTSSIYNFNHVSQIHKQLNTLRSFPNGKRNCYSLTPKLGKNNKYIIRAYFAYGNYDNKHKPPVFDLHLGVNFFRTINSSESVVIRIEAIYFASTETIDLCLVNIDQGVPFISLLELWPLDNSIYQSSTTLLTLDLLTRVNLGASDDNFIRYTDDIYGRSWEVPNNYNKKELNTSSAIDLDKLVDPYKLPAEVLSSAVEPLNSDSLEFTLNYSMDSEYYAYLHFFDFEDRTNKQKRRLKIVTFNGFGDDNVTQFTLSYWKPNSIILHIKPGMGIWKILIEAKPDSELPAMLNALEIYRVVPQLYSSTQQEDVDAICHIKDVYMIHEMNWQGDPCGPKNFTWEGVKCSNGDSPRIISLNLSSSKLSGEIDASFFNLTRLETLDLSNNELTGEVPESFAKLPQLQFLNLSRNMLTGSIPESLKEKSSNNSLQLSLDGNTCSYQTGPSKRNHKKFIIPLVASITAFVVVVLIMSTIVMVIWRLRKKGKVISSISVKDELLKSTNQVFSYSEILRITNNFTTMIGKGGFGKVYLGTLECGKRVAVKILSSPSAQGYKEFQSEAKLLMQVHHRNVVSLVGYCDEGDTKALIYEYLPEGNLQQKLSDKNPFFLEWTQRLKIAMDAANGLDYLHNGCKPPVIHRDLKTSNILLDENMHAKISDFGVSKTFANDTDTYVTTYPAGTPGYLDPEFYCSGTLNKKSDVYSFGIILLELITGQPALRGTPENLSYILPWVNNKLRTGNIQEIVDPRLHGKYNGASAWKFIGIAMSCLPQVPIHRPDIGHIALELKDCLALELSLERTVSNIRDSLLTSSRQIEFL*	886

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu8g00278	885	Gene3D	Phosphorylase Kinase; domain 1	567	660	-	-
	Lapu8g00278	885	Pfam	Protein tyrosine and serine/threonine kinase	587	789	IPR001245	GO:0004672\|GO:0006468
	Lapu8g00278	885	PANTHER	OS07G0107800 PROTEIN-RELATED	42	858	-	-
	Lapu8g00278	885	FunFam	Leucine-rich repeat receptor-like protein kinase	562	660	-	-
	Lapu8g00278	885	Pfam	Malectin-like domain	44	370	IPR024788	-
	Lapu8g00278	885	FunFam	Leucine-rich repeat receptor-like kinase	381	512	-	-
	Lapu8g00278	885	SUPERFAMILY	Protein kinase-like (PK-like)	569	851	IPR011009	-
	Lapu8g00278	885	PRINTS	Leucine-rich repeat signature	449	462	-	-
	Lapu8g00278	885	PRINTS	Leucine-rich repeat signature	470	483	-	-
	Lapu8g00278	885	Gene3D	Ribonuclease Inhibitor	388	505	IPR032675	-
	Lapu8g00278	885	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	661	867	-	-
	Lapu8g00278	885	Pfam	Leucine rich repeat	427	483	IPR001611	GO:0005515
	Lapu8g00278	885	Gene3D	Transferase(Phosphotransferase) domain 1	661	872	-	-
	Lapu8g00278	885	SMART	serkin_6	585	858	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00278	885	SUPERFAMILY	L domain-like	408	501	-	-
	Lapu8g00278	885	CDD	STKc_IRAK	591	855	-	-
	Lapu8g00278	885	ProSitePatterns	Protein kinases ATP-binding region signature.	591	613	IPR017441	GO:0005524
	Lapu8g00278	885	ProSiteProfiles	Protein kinase domain profile.	585	858	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu8g00278	885	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	705	717	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu8g00278	Lapu-Chr8	15721439	15746010	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu8g00278	37	859	Receptor kinase-like Gene Family	AT2G19230	42.005	0.0	612

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Lapu8g00278		Malectin_like	3.3e-78	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu8g00278	-		-	mtr:11437028	974.541