Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00277 ATGGAAGAAATATGTGGAGCCAAAGTTGGCAACATGGTTCATAAGGCCAAGCCATATGTGTTAACTGTAGGGTTGCAATTTGGGATGGCAGGGACATACCTCTTCACCATGGCAAGTCTCAACCATGGAATGAGTCGTTTCGTGTTCATTGTGTATCGCAATGCCATTGCTGCATTGGCTCTTGCTCCCTTTGCCTTGATATTTGAAAGGAAAGTTAGGCCAAAGATGACATGGACTGTTTTCATACAGATACTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGTTTTACTTTCTTGGGGATGCAATACACTTCTGCTTCCTTTGCATCTGCTGTTATGAATGCCGTACCCTCTGTAACCTTTGTGCTTGCAGTAATTCTGAGGTTAGAGCGGGTAAAAATGAATGAATTACGTAGTCAAGCGAAAGTGCTGGGAACCTTGGTGACATTTGCTGGGGCTTTGTTAATGACACTATACAAAGGTCCTCAATTTGACCTATTTCATCACTCAAACACAACTCACCAACAAGGTGGGAGCCACTCCTCTCAGAATAATCACTCACACTGGGTCTCAGGAACTCTCTTCATTTGCCTGGGTTGTCTCGCATGGTCTTCCTTCTACATATTGCAGTCAATAACAGTGAAAAGGTACCCTGCGGAACTGTCTCTGTCATCGTTGATATGCTTGGGAGGTGCATTGCAGAGTGCTGTGGTTGCTCTGATCGCAGATCACAACCCTCGTGCATGGGCTATTGGTTTCGATTACACCCTCTATGGCCCTCTATACACTGGAATAATGAGTTCAGGAATAGCATATTATATACAAGGGTTGGTAATGCAAAGCAGAGGCCCAGTATTTGTGACATCCTTTAATCCTCTATGCATGATCATTGTTACGGCTTTGGGCTCCCTTCTTCTTGGAGAGCACCTCTACCTGGGAAGCATCATTGGAGGAATAATTATCGCAGTGGGTCTTTACTCAGTGGTGTGGGGAAAAGGCAAAGATTATGGAGATGACACGTCATCATCACCAGCAAGAACAAAAGAAACAGAAACAATGCAGCTCCCAGTTACCTCACCAAATAATAAATGA 1098 0.4426 MEEICGAKVGNMVHKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRFVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFIQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVILRLERVKMNELRSQAKVLGTLVTFAGALLMTLYKGPQFDLFHHSNTTHQQGGSHSSQNNHSHWVSGTLFICLGCLAWSSFYILQSITVKRYPAELSLSSLICLGGALQSAVVALIADHNPRAWAIGFDYTLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSLLLGEHLYLGSIIGGIIIAVGLYSVVWGKGKDYGDDTSSSPARTKETETMQLPVTSPNNK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00277 365 MobiDBLite consensus disorder prediction 348 365 - -
Lapu8g00277 365 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020
Lapu8g00277 365 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Lapu8g00277 365 PANTHER WAT1-RELATED PROTEIN 17 342 IPR030184 GO:0016020|GO:0022857
Lapu8g00277 365 MobiDBLite consensus disorder prediction 339 365 - -
Lapu8g00277 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Lapu8g00277 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00277 Lapu-Chr8 15655863 15660929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00277 10 365 Nodulin-like Gene Family AT4G08300 47.486 1.62e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00277 - - gmx:100782997 632.484