Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00276 ATGATGATGGATACAAAGTGTGGTGCTAGATTTAGCAACATGTTCAATCTGGCAAAGCCTTATTTGTTAACTGTGGGGTTGCAATTTGGAATGGCTGGAACATTCATCATGACTAAGGCTTGTCTGGATCATGGAATGAGTCGATTTGTGTTAACTGTGTATCGTAATGGGGTTGCTGCGTTTGCTCTTGCTCCTTTTGCCATTATCTTTGAAAGGAACGTTAGGCCGAAAATGACAATGTCTATCTTCATGCAGATACTAGCCCTTGGATTTCTTGAGCCAGTGATTGACCAAGGCTTCACTTGTTTGGGGATGCAATACACTTCAGCTTCTTTTGCATCTGCTATTATGAACGCTGTACCTTCAGTAACCTTTGTGATAGCAGTAATTCTCAGGTTAGAGAGTGTAAAGATGAAGGAGGTACGCAGTCAAGCGAAGGTAATTGGAACCTTGGTAACCTTTGGTGGGGCTTTGTTGATGACACTTTACAAAGGTCCCCAAATCAATCTTTTTAATCATCCAAACAGTACCCACCAGAACGATGAAAGTCACACTCATGGGGGTCACAAAAACTGGGTCACAGGGACCCTATTTTTATGCCTTGGTTGTTTGGCTTGGTCCTCCTTTTACATTTTGCAGTCCATAACAGTGAAAATGTACCCTGCGGAATTATCACTGTCATCGTTGATATGCTTGGCGGGTGCATTGCAAAGTGCTGTGGTTGCTCTGATTGCAGAGCACAACCCTCGTGCTTGGGCTATTGGTTTCGACTACACCCTCTATGGCCCTCTTTATGCTGGAATTATGAGTTCAGGAATAGCATATTATGTGCAAGGACTGGTAATGAAAAGCAGAGGGCCAGTGTTCATGACATCATTTCTTCCTCTATTAATGATCAACGTTGCTACTTTTGGCTCTTTTCTTCTTGGAGAACACCTCTACCTAGGAAGTATCATTGGTGCCATCATTATCGTGGTGGGTCTTTACTCAGTGGTGTGGGGTAAGGCCAAAGACTATCCACTCCTCCAACACCCATCACCAACTGCAACAAAGGAGACAGAAGCACAGCACCTTCCATAA 1080 0.437 MMMDTKCGARFSNMFNLAKPYLLTVGLQFGMAGTFIMTKACLDHGMSRFVLTVYRNGVAAFALAPFAIIFERNVRPKMTMSIFMQILALGFLEPVIDQGFTCLGMQYTSASFASAIMNAVPSVTFVIAVILRLESVKMKEVRSQAKVIGTLVTFGGALLMTLYKGPQINLFNHPNSTHQNDESHTHGGHKNWVTGTLFLCLGCLAWSSFYILQSITVKMYPAELSLSSLICLAGALQSAVVALIAEHNPRAWAIGFDYTLYGPLYAGIMSSGIAYYVQGLVMKSRGPVFMTSFLPLLMINVATFGSFLLGEHLYLGSIIGAIIIVVGLYSVVWGKAKDYPLLQHPSPTATKETEAQHLP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00276 359 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020
Lapu8g00276 359 Pfam EamA-like transporter family 20 161 IPR000620 GO:0016020
Lapu8g00276 359 PANTHER WAT1-RELATED PROTEIN 20 339 IPR030184 GO:0016020|GO:0022857
Lapu8g00276 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 165 - -
Lapu8g00276 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00276 Lapu-Chr8 15575836 15579603 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00276 19 338 Nodulin-like Gene Family AT1G44800 50.625 4.28e-114 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00276 - - vun:114194044 610.142