Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00275 ATGGGCCTAGTGAGCCAAGAGCCCATGCTGTTTAATGACACCATTCGTGCAAATATTGCATATGGTAAAGGCAGGGATACAACAGAGACAGAAGTTATAGCTGCAGCAGAACTGGCAAATGCTCACAACTTCACTAGTAGTTTGCAGGAGGGTTTTGACACAATAGTAGGGGAGAGAGGGATTAAACTATCTGGAGGGCAGAAGCAGCGGGTGGCAATTGCGCGAGCTATAGTGAAGAATCCAAAAATATTGCTACTAGATGAAGCCACAAGTGCATTTGATGTTGAGTCTAAAAAAGTGGTTTAG 306 0.4412 MGLVSQEPMLFNDTIRANIAYGKGRDTTETEVIAAAELANAHNFTSSLQEGFDTIVGERGIKLSGGQKQRVAIARAIVKNPKILLLDEATSAFDVESKKVV* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00275 101 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 101 IPR039421 -
Lapu8g00275 101 Gene3D - 1 101 IPR027417 -
Lapu8g00275 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 100 IPR027417 -
Lapu8g00275 101 Pfam ABC transporter 2 91 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00275 Lapu-Chr8 15516693 15517139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00275 1 101 Calmodulin-binding Proteins AT2G36910 62.376 1.58e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00275 K05658 - gmx:100799760 176.407